RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 PGAM2P15259 253 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 S100GP29377 79 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 PRDX2P32119 198 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 EIF2B2P49770 351 aaKnown RBP7.12□□□□□ -1.27
VAPB-206ENST00000520497 SEC61A1P61619 476 aaKnown RBP7.12□□□□□ -1.27
VAPB-206ENST00000520497 COL10A1Q03692 680 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 ZFP69Q49AA0 526 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 ATPAF1Q5TC12 328 aaPredicted RBP7.12□□□□□ -1.27
VAPB-206ENST00000520497 ZNF626Q68DY1 528 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 LPCAT3Q6P1A2 487 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 TRAT1Q6PIZ9 186 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 C17orf107Q6ZR85 190 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 BOLLQ8N9W6 283 aaKnown RBP7.12□□□□□ -1.27
VAPB-206ENST00000520497 OR5T2Q8NGG2 359 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 PLPPR1Q8TBJ4 325 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 CCL17Q92583 94 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 C14orf79Q96F83 325 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 SDSLQ96GA7 329 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 SHARPINQ9H0F6 387 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 GHITMQ9H3K2 345 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 RAB9BQ9NP90 201 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 DLL4Q9NR61 685 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 KCNIP1Q9NZI2 227 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 ZNF230Q9UIE0 474 aaPredicted RBP7.12□□□□□ -1.27
VAPB-206ENST00000520497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.12□□□□□ -1.272e-8■■■■■ 32.4
VAPB-206ENST00000520497 PDZD2O15018 2839 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 APCP25054 2843 aa7.12□□□□□ -1.27
VAPB-206ENST00000520497 PPIAL4EA0A075B759 164 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 IGHV3OR15-7A0A075B7D8 119 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 TRAV38-1A0A0B4J264 116 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 PIGBOS1A0A0B4J2F0 54 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 TMEM30CPA0ZSE6 113 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 FAM172BPA6NC97 362 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 NKX6-3A6NJ46 265 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 TRDCB7Z8K6 153 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 PPIAL4DF5H284 164 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 HSPB6O14558 160 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 TNFRSF13BO14836 293 aaPredicted RBP7.11□□□□□ -1.27
VAPB-206ENST00000520497 SNAPC5O75971 98 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 ZNF205O95201 554 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 PPIAL4FP0DN26 164 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 ANXA7P20073 488 aaKnown RBP7.11□□□□□ -1.27
VAPB-206ENST00000520497 COL8A2P25067 703 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 CDKN1AP38936 164 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 OR3A1P47881 315 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 CD83Q01151 205 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 KCNJ8Q15842 424 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 HFEQ30201 348 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 ABCA11PQ4W5N1 156 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 C6orf183Q5T699 404 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 LIN54Q6MZP7 749 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 ZNF880Q6PDB4 577 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 ZNF497Q6ZNH5 498 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 ZNF788Q6ZQV5 615 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 OVCH2Q7RTZ1 564 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 SLC25A42Q86VD7 318 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 TCTE3Q8IZS6 198 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 ZNF561Q8N587 486 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 SPICQ8N5J4 248 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 CCDC71LQ8N9Z2 235 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 OR4A4PQ8NGN8 299 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 ZNF431Q8TF32 576 aaPredicted RBP7.11□□□□□ -1.27
VAPB-206ENST00000520497 COQ2Q96H96 371 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 SNX22Q96L94 193 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 GAFA1Q96PS6 74 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 PHB2Q99623 299 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 BEX2Q9BXY8 128 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 DNTTIP1Q9H147 329 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 BEX1Q9HBH7 125 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 TMEM165Q9HC07 324 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 Q9N2K0 584 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 FLVCR2Q9UPI3 526 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 PPIAL4AQ9Y536 164 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 MAB21L2Q9Y586 359 aa7.11□□□□□ -1.27
VAPB-206ENST00000520497 IGKV1D-8A0A087WSZ0 117 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 A0A1B0GW55 424 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 CEACAM18A8MTB9 384 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 LYNX1G3V0Z9 82 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 BOLA2-SMG1P6H3BVE0 249 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 K7N7A8 449 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 SIGLEC5O15389 551 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 FABP7O15540 132 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 LY6HO94772 140 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
VAPB-206ENST00000520497 IGHV2-70P01814 119 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 HLA-AP01891 365 aaKnown RBP7.1□□□□□ -1.27
VAPB-206ENST00000520497 OR4E1P0C645 316 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 GSTT2P0CG29 244 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 DUX4L2P0CJ85 424 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 DUX4L3P0CJ86 424 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 DUX4L4P0CJ87 422 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 DUX4L5P0CJ88 424 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 DUX4L6P0CJ89 424 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 DUX4L7P0CJ90 424 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 ZNF728P0DKX0 622 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 LYNX1P0DP58 116 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 DAOP14920 347 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 VAMP1P23763 118 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 EFNA4P52798 201 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 HLA-DRB3P79483 266 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms