RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 DUSP16Q9BY84 665 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC35B3Q9H1N7 401 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC25A51Q9H1U9 297 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 LRTM1Q9HBL6 345 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 APMAPQ9HDC9 416 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 RAB9BQ9NP90 201 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM9BQ9NQ34 198 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 HSPB8Q9UJY1 196 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 PILRBQ9UKJ0 227 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 RALYQ9UKM9 306 aaKnown RBP3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SIGLEC7Q9Y286 467 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC17A4Q9Y2C5 497 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 LSM2Q9Y333 95 aaKnown RBP3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 ENPP4Q9Y6X5 453 aa3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZFC3H1O60293 1989 aaKnown RBP3.94□□□□□ -1.78
HMGB3P13-201ENST00000511263 DOCK5Q9H7D0 1870 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 C13orf42A0A1B0GVH6 325 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM129A0AVI4 362 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 PSMB11A5LHX3 300 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 FAM90A26D6RGX4 464 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 RFXANKO14593 260 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 CLDN11O75508 207 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 SOD1P00441 154 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 TRGC2P03986 189 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 GBAP04062 536 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 EDN1P05305 212 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 FCGR3AP08637 254 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 PGA3P0DJD8 388 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 ERGP11308 486 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 CTSEP14091 401 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 CDKN2BP42772 138 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 TFPI2P48307 235 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 DAPP51397 102 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 GPM6AP51674 278 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 CCL23P55773 120 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 CYCSP99999 105 aaKnown RBP3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 HSD52Q0P140 79 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 SMAGPQ0VAQ4 97 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM267Q0VDI3 215 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 KIR2DS3Q14952 304 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 ELOBQ15370 118 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 RGNQ15493 299 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 EXT1Q16394 746 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 GABRA6Q16445 453 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 ACKR1Q16570 336 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 TRMT12Q53H54 448 aaKnown RBP3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC25A53Q5H9E4 307 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 RHBDD2Q6NTF9 364 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 PODNL1Q6PEZ8 512 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 Q7L0L9 218 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 DET1Q7L5Y6 550 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 COMMD6Q7Z4G1 85 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 CENPVQ7Z7K6 275 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 ACOT1Q86TX2 421 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 LRRC75A-AS1Q8N1F1 130 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 C2orf73Q8N5S3 287 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 SUMF2Q8NBJ7 301 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZNF439Q8NDP4 499 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 B3GNT7Q8NFL0 401 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR52B4Q8NGK2 314 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 MARCH1Q8TCQ1 289 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLAMF6Q96DU3 332 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 LRRC3BQ96PB8 259 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 TBX15Q96SF7 602 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC25A21Q9BQT8 299 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 C20orf24Q9BUV8 137 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC39A8Q9C0K1 460 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM126AQ9H061 195 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 ATG10Q9H0Y0 220 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 C1orf198Q9H425 327 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 SRD5A3Q9H8P0 318 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 CDH20Q9HBT6 801 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 CA10Q9NS85 328 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 DCAF13Q9NV06 445 aaKnown RBP3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 MED29Q9NX70 200 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 ABRACLQ9P1F3 81 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 SS18L2Q9UHA2 77 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 ERG28Q9UKR5 140 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 PSG8Q9UQ74 426 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 NTNG1Q9Y2I2 539 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 HES2Q9Y543 173 aa3.93□□□□□ -1.78
HMGB3P13-201ENST00000511263 IGLV5-45A0A087WSX0 123 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 BORCS7-ASMTA0A0B4J1R7 106 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 A0A0G2JMM0 328 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 A0A0J9YY10 115 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 A0A1B0GU03 582 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 A0A1B0GX78 115 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 A0A1W2PPB8 328 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 ARRDC5A6NEK1 342 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 KIR3DP1A8MWS1 328 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 F5H5T6 163 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 CLDN34H7C241 214 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 M0QXV9 152 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 DCTN6O00399 190 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 XKRYO14609 159 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 HSD17B6O14756 317 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 FOXH1O75593 365 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 GRAP2O75791 330 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 KLF8O95600 359 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms