RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, human

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP50-218	ENST00000493456	GP9	P14770	177 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	CCR9	P51686	369 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	KISS1	Q15726	138 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	KCTD20	Q7Z5Y7	419 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	OR51A4	Q8NGJ6	313 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	OR52M1	Q8NGK5	317 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	PLPPR1	Q8TBJ4	325 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	CPNE2	Q96FN4	548 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	NR1H4	Q96RI1	486 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	TM2D3	Q9BRN9	247 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	THTPA	Q9BU02	230 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	GNB4	Q9HAV0	340 aa		13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP50-218	ENST00000493456	TCRBV3S1	A0A5B6	114 aa		13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	SAP30	O75446	220 aa		13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	GZMH	P20718	246 aa		13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	NANOS3	P60323	173 aa	Known RBP	13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	FLOT2	Q14254	428 aa		13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	ZNF491	Q8N8L2	437 aa		13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	PXT1	Q8NFP0	134 aa		13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	OR6Q1	Q8NGQ2	317 aa		13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	RFK	Q969G6	155 aa		13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	ST6GALNAC6	Q969X2	333 aa		13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	ZNF107	Q9UII5	783 aa	Predicted RBP	13.72	□□□□□ -0.21
NUP50-218	ENST00000493456	HTR1A	P08908	422 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	SPN	P16150	400 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	GNB1	P62873	340 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	KIAA0141	Q14154	515 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP50-218	ENST00000493456		Q3ZCU0	254 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	ZNF691	Q5VV52	312 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	KDM4D	Q6B0I6	523 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	OR10AC1	Q8NH08	325 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	DCUN1D4	Q92564	292 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	OR51J1	Q9H342	316 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	GHITM	Q9H3K2	345 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	EDA2R	Q9HAV5	297 aa		13.71	□□□□□ -0.21
NUP50-218	ENST00000493456	LDLRAD4	O15165	306 aa		13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	SULT1B1	O43704	296 aa		13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	T-ENOL	P0DO92	83 aa		13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	PPIF	P30405	207 aa	Known RBP	13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	F2RL1	P55085	397 aa		13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	GNGT1	P63211	74 aa		13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	GABPB1	Q06547	395 aa	Predicted RBP	13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	OR5D14	Q8NGL3	314 aa		13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	OR8J1	Q8NGP2	316 aa		13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	KLK15	Q9H2R5	256 aa		13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	GFOD1	Q9NXC2	390 aa		13.7	□□□□□ -0.22
NUP50-218	ENST00000493456	TRAV39	A0A0B4J263	110 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	TRIM64C	A6NLI5	447 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	ZNF736	B4DX44	427 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	SDCBP	O00560	298 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	SLC16A6	O15403	523 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	IGLV1-40	P01703	118 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	RPSA	P08865	295 aa	Known RBP	13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	VEGFC	P49767	419 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	ZNF137P	P52743	207 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	ZSCAN26	Q16670	478 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	ADAMTSL5	Q6ZMM2	481 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	SERPINA12	Q8IW75	414 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	EME1	Q96AY2	570 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	DPCD	Q9BVM2	203 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	IFT22	Q9H7X7	185 aa		13.69	□□□□□ -0.22
NUP50-218	ENST00000493456	TMEM30CP	A0ZSE6	113 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456	OR4C45	A6NMZ5	311 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456		G3V2T6	193 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456	C15orf65	H3BRN8	121 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456	GALE	Q14376	348 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456	PIGY	Q3MUY2	71 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456	PARP16	Q8N5Y8	322 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456	SUMF2	Q8NBJ7	301 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456	ARL11	Q969Q4	196 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456	OR5B12	Q96R08	314 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456	GABARAPL1	Q9H0R8	117 aa		13.68	□□□□□ -0.22
NUP50-218	ENST00000493456	DAPL1	A0PJW8	107 aa		13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	ORC5	O43913	435 aa		13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	OR8U9	P0C7N5	309 aa		13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	SLC2A2	P11168	524 aa	Predicted RBP	13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	RAB9A	P51151	201 aa		13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	ALKBH1	Q13686	389 aa	Known RBP	13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	RSU1	Q15404	277 aa		13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	MMD	Q15546	238 aa		13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	SLC25A48	Q6ZT89	311 aa	Known RBP	13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	LYPD6	Q86Y78	171 aa		13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	TNFAIP8L1	Q8WVP5	186 aa		13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	DLX4	Q92988	240 aa	Predicted RBP	13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	GPER1	Q99527	375 aa		13.67	□□□□□ -0.22
NUP50-218	ENST00000493456	FAM90A10P	A6NDY2	464 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456		A8MZ25	164 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	LINC01619	G3V211	115 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456		G3V318	75 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	GABRP	O00591	440 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	MAGEB3	O15480	346 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	JTB	O76095	146 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	HLA-DRB1	P01911	266 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	IGHV4-30-4	P0DP06	118 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	MYF6	P23409	242 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	TMEM30B	Q3MIR4	351 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	NHLRC3	Q5JS37	347 aa		13.66	□□□□□ -0.22
NUP50-218	ENST00000493456	LPCAT4	Q643R3	524 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms