RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 RSBN1Q5VWQ0 802 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-232ENST00000489053 LIPKQ5VXJ0 399 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 TRAT1Q6PIZ9 186 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 SLC16A12Q6ZSM3 486 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 MOB3BQ86TA1 216 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 PRR18Q8N4B5 295 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 Q8NFD4 153 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 PLPPR1Q8TBJ4 325 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 FBLIM1Q8WUP2 373 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 PHYHIPQ92561 330 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 LEAP2Q969E1 77 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 CNBD2Q96M20 576 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 NEDD4LQ96PU5 975 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 SLC25A33Q9BSK2 321 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 BANF2Q9H503 90 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 Q9H521 79 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 LIN7BQ9HAP6 207 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 PLGRKTQ9HBL7 147 aa7.35□□□□□ -1.23
HDAC6-232ENST00000489053 CHMP1AQ9HD42 196 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-232ENST00000489053 A0A087X0M5 115 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 A0A1B0GX30 115 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 MAGEA13PA6NCF6 341 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A10PA6NDY2 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A18PA6NE21 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A16PA6NEW6 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A20PA6NIJ5 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A7PA6NKC0 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A22PA8MWA6 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A12PA8MX19 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A5PA8MXJ8 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A23PA8MXZ1 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 J3QR06 171 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 CCRL2O00421 344 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 CA11O75493 328 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 OR2F2O95006 317 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A15PP0C7V4 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A13PP0C7W8 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A14PP0C7W9 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FAM90A24PP0C7X0 464 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 JUNBP17275 347 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FUT3P21217 361 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 GDNFP39905 211 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 RAB7AP51149 207 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 RPS11P62280 158 aaKnown RBP eCLIP7.34□□□□□ -1.23
HDAC6-232ENST00000489053 NSUN5P1Q3KNT7 163 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 TMEM30BQ3MIR4 351 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 KHDC1LQ5JSQ8 128 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 RNLSQ5VYX0 342 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 CRIP3Q6Q6R5 217 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 BAIAP2L2Q6UXY1 529 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 CENPVQ7Z7K6 275 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-232ENST00000489053 ZNF485Q8NCK3 441 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 PIFOQ8TCI5 191 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 NRG4Q8WWG1 115 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 TMEM203Q969S6 136 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 TMEM59Q9BXS4 323 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 ZNF702PQ9H963 129 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 FKBP14Q9NWM8 211 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 PSG11Q9UQ72 335 aa7.34□□□□□ -1.23
HDAC6-232ENST00000489053 A0A1W2PP11 408 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 UBE2QL1A1L167 161 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 HSD17B6O14756 317 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 ORC5O43913 435 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 PDCD6O75340 191 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 IGLV1-47P01700 117 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 GAPDHP04406 335 aaKnown RBP7.33□□□□□ -1.24
HDAC6-232ENST00000489053 GLAP06280 429 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 TMEM11P17152 192 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 SRMP19623 302 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 HTR2CP28335 458 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 KRTAP10-3P60369 221 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 MRPS15P82914 257 aaKnown RBP7.33□□□□□ -1.24
HDAC6-232ENST00000489053 PAX5Q02548 391 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 EMX1Q04741 257 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-232ENST00000489053 HABP2Q14520 560 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-232ENST00000489053 HNF4GQ14541 408 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 ABCA11PQ4W5N1 156 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 LDLRAD2Q5SZI1 272 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 SYT6Q5T7P8 510 aaPredicted RBP7.33□□□□□ -1.24
HDAC6-232ENST00000489053 LAIR2Q6ISS4 152 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 ZNF497Q6ZNH5 498 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 PRSS48Q7RTY5 328 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 OR8H3Q8N146 312 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 OR4F17Q8NGA8 305 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 OR4X2Q8NGF9 303 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 OR6M1Q8NGM8 313 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 OR4K15Q8NH41 348 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 OR56B4Q8NH76 319 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 KCNG3Q8TAE7 436 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 UBALD1Q8TB05 177 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 RBM14Q96PK6 669 aaKnown RBP7.33□□□□□ -1.24
HDAC6-232ENST00000489053 OR4F4Q96R69 305 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 ANKRD60Q9BZ19 345 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 ABRACLQ9P1F3 81 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 MOB4Q9Y3A3 225 aa7.33□□□□□ -1.24
HDAC6-232ENST00000489053 IGHV3-43A0A0B4J1X8 118 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 A0A1W2PPE3 182 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 NCBP2LA6PVI3 153 aaKnown RBP7.32□□□□□ -1.24
HDAC6-232ENST00000489053 NPIPB11E5RHQ5 1161 aa7.32□□□□□ -1.24
HDAC6-232ENST00000489053 TXNL1O43396 289 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms