RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SLC23A3Q6PIS1 610 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 RABEPKQ7Z6M1 372 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 NFAM1Q8NET5 270 aaPredicted RBP10.96□□□□□ -0.66
VPS52-218ENST00000482399 FGFBP3Q8TAT2 258 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 SRXN1Q9BYN0 137 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 SEBOXQ9HB31 216 aaPredicted RBP10.96□□□□□ -0.66
VPS52-218ENST00000482399 USF3Q68DE3 2245 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 ZNF318Q5VUA4 2279 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 ABCA1O95477 2261 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 VAMP5O95183 116 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 ICAM4Q14773 271 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 HIKESHIQ53FT3 197 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 MCEMP1Q8IX19 187 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 GALNT14Q96FL9 552 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 FAM234AQ9H0X4 552 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 TUBA4BQ9H853 241 aa10.96□□□□□ -0.66
VPS52-218ENST00000482399 XKRY2A2RUG3 117 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 MAP1LC3B2A6NCE7 125 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 GATCO43716 136 aaKnown RBP10.95□□□□□ -0.66
VPS52-218ENST00000482399 DFFBO76075 338 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 CDS2O95674 445 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 IFNA1P01562 189 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 DEFA4P12838 97 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 EGR1P18146 543 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 DDTP30046 118 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 RBM11P57052 281 aaKnown RBP10.95□□□□□ -0.66
VPS52-218ENST00000482399 LPAL2Q16609 132 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 RSPO1Q2MKA7 263 aaPredicted RBP10.95□□□□□ -0.66
VPS52-218ENST00000482399 WDFY3Q8IZQ1 3526 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 ZNF709Q8N972 641 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 HS3ST6Q96QI5 342 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 ATG101Q9BSB4 218 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 MAP1LC3BQ9GZQ8 125 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 OPA3Q9H6K4 179 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 NOSIPQ9Y314 301 aaKnown RBP10.95□□□□□ -0.66
VPS52-218ENST00000482399 TMEM50AO95807 157 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 BAXQ07812 192 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 RAB30Q15771 203 aa10.95□□□□□ -0.66
VPS52-218ENST00000482399 ZNF574Q6ZN55 896 aaPredicted RBP10.95□□□□□ -0.66
VPS52-218ENST00000482399 SELENOHQ8IZQ5 122 aaKnown RBP10.95□□□□□ -0.66
VPS52-218ENST00000482399 NPIPB13A6NJU9 1138 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 NPIPB4C9JG80 1138 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 CCL4P13236 92 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 PRDX4Q13162 271 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 PMS2P11Q13670 270 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 UNQ6494/PRO21346Q6UXR6 183 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 C18orf12Q96KH6 178 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 ATP5SQ99766 215 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 EGLN1Q9GZT9 426 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 C12orf49Q9H741 205 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 LYRM2Q9NU23 88 aaPredicted RBP10.94□□□□□ -0.66
VPS52-218ENST00000482399 V9GYS6 101 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 PITX3O75364 302 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 CCL1P22362 96 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 CLDN15P56746 228 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 H3F3AP84243 136 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 ZNF816Q0VGE8 651 aaPredicted RBP10.94□□□□□ -0.66
VPS52-218ENST00000482399 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.94□□□□□ -0.66
VPS52-218ENST00000482399 GPR87Q9BY21 358 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 FOXD3Q9UJU5 478 aaPredicted RBP10.94□□□□□ -0.66
VPS52-218ENST00000482399 MUC22E2RYF6 1773 aaPredicted RBP10.94□□□□□ -0.66
VPS52-218ENST00000482399 SYNGR1O43759 233 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 NDUFB7P17568 137 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 LTBRP36941 435 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 FAM27BQ5VT28 67 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 OR10D3Q8NH80 312 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 CPT1CQ8TCG5 803 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 ADGRG7Q96K78 797 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 RBKSQ9H477 322 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 FUT9Q9Y231 359 aa10.94□□□□□ -0.66
VPS52-218ENST00000482399 FAM166BA8MTA8 275 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 ZNF737O75373 536 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 SNRPCP09234 159 aaKnown RBP10.93□□□□□ -0.66
VPS52-218ENST00000482399 TGFBR3Q03167 851 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 PLP2Q04941 152 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 COL19A1Q14993 1142 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 SPSB3Q6PJ21 355 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 OR13D1Q8NGV5 346 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 TMEM204Q9BSN7 226 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 CADP27708 2225 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 KIR2DS1A0A191URI9 304 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 CLEC18AA5D8T8 446 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 SLC22A20A6NK97 555 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 RRP8O43159 456 aaKnown RBP10.93□□□□□ -0.66
VPS52-218ENST00000482399 PTBP3O95758 552 aaKnown RBP10.93□□□□□ -0.66
VPS52-218ENST00000482399 CD55P08174 381 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 PTGDSP41222 190 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 KIR2DS4P43632 304 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 GLIPR1P48060 266 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 DSCR4P56555 118 aaPredicted RBP10.93□□□□□ -0.66
VPS52-218ENST00000482399 TAS2R30P59541 319 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 HBG1P69891 147 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 HBG2P69892 147 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 KIR2DS1Q14954 304 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 LURAP1LQ8IV03 231 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 CLEC18CQ8NCF0 446 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 Q9N2K0 584 aa10.93□□□□□ -0.66
VPS52-218ENST00000482399 CRYAAP02489 173 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 SUCLG1P53597 346 aaKnown RBP10.92□□□□□ -0.66
VPS52-218ENST00000482399 ARF1P84077 181 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms