RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	DMRTC1	Q5HYR2	192 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	GPR107	Q5VW38	600 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	HCP5	Q6MZN7	132 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	RBMS3	Q6XE24	437 aa	Known RBP	4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	RNF144B	Q7Z419	303 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	THNSL2	Q86YJ6	484 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	BPIFB2	Q8N4F0	458 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	C19orf18	Q8NEA5	215 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR10R2	Q8NGX6	335 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR9G1	Q8NH87	305 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	DEDD2	Q8WXF8	326 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	H1FX	Q92522	213 aa	Known RBP	4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	DYRK2	Q92630	601 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	FAM46B	Q96A09	425 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	RFT1	Q96AA3	541 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	YPEL2	Q96QA6	119 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	OCSTAMP	Q9BR26	566 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	CLEC7A	Q9BXN2	247 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR51E2	Q9H255	320 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	PPA2	Q9H2U2	334 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	DPAGT1	Q9H3H5	408 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	ELL3	Q9HB65	397 aa	Predicted RBP	4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	CALY	Q9NYX4	217 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	NDUFA13	Q9P0J0	144 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	IL36RN	Q9UBH0	155 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	DUX4	Q9UBX2	424 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	SLC23A1	Q9UHI7	598 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF107	Q9UII5	783 aa	Predicted RBP	4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	SCOC	Q9UIL1	159 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	PITPNC1	Q9UKF7	332 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	ING4	Q9UNL4	249 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	GAB2	Q9UQC2	676 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	AK6	Q9Y3D8	172 aa	Known RBP	4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	MMP24	Q9Y5R2	645 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	PEX16	Q9Y5Y5	336 aa		4.15	□□□□□ -1.75
HDAC6-223	ENST00000480525	CUBN	O60494	3623 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525		A0A075B6Q4	140 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	MEIKIN	A0A087WXM9	373 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	IGHV2-26	A0A0B4J1V2	119 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	TMEM272	A0A1B0GTI8	110 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	SMIM31	A0A1B0GVY4	71 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525		A0A1W2PP11	408 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	LY6L	H3BQJ8	138 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525		M0QZK8	103 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	SIRPB1	O00241	398 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	SPINT2	O43291	252 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	NDUFA7	O95182	113 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	MPIG6B	O95866	241 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	LPL	P06858	475 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	IGHV4-38-2	P0DP08	117 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	HIST1H1D	P16402	221 aa	Known RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	HTR1D	P28221	377 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	BLVRB	P30043	206 aa	Predicted RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	SAA4	P35542	130 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	CBX5	P45973	191 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	IER3	P46695	156 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	GLIPR1	P48060	266 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	CEBPD	P49716	269 aa	Predicted RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	RAB7A	P51149	207 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	RORC	P51449	518 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	PRRX1	P54821	245 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	TMEM50B	P56557	158 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	EDDM3B	P56851	147 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	LOXL3	P58215	753 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	MRPS10	P82664	201 aa	Known RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	TAGLN	Q01995	201 aa	Known RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	SSBP1	Q04837	148 aa	Known RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	AES	Q08117	197 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	EBI3	Q14213	229 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	HLA-DRB5	Q30154	266 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	PLA1A	Q53H76	456 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	HACD4	Q5VWC8	232 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	SLC25A48	Q6ZT89	311 aa	Known RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525		Q6ZTK2	550 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	GPR141	Q7Z602	305 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	FAM185A	Q8N0U4	392 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR8H3	Q8N146	312 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	PIP4P2	Q8N4L2	257 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR51D1	Q8NGF3	324 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR8H1	Q8NGG4	311 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR4P4	Q8NGL7	312 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR4A4P	Q8NGN8	299 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	SPATA3	Q8NHX4	192 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	PLPPR1	Q8TBJ4	325 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	MRPL30	Q8TCC3	161 aa	Known RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	EDARADD	Q8WWZ3	215 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	TMEM158	Q8WZ71	300 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	GALM	Q96C23	342 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	ORAI1	Q96D31	301 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	RAB3C	Q96E17	227 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	CHCHD6	Q9BRQ6	235 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	CABLES2	Q9BTV7	478 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	MMP28	Q9H239	520 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	SCPEP1	Q9HB40	452 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	PLEKHJ1	Q9NW61	149 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 82 ms