RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ACVR1Q04771 509 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 SMAD4Q13485 552 aaKnown RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 SLC23A3Q6PIS1 610 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 TM4SF19Q96DZ7 209 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 LINC00615Q96LM1 132 aaPredicted RBP4.82□□□□□ -1.64
USF3-202ENST00000478658 GGTLC1Q9BX51 225 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 ANAPC10Q9UM13 185 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 LHBP01229 141 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 RHOGP84095 191 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 GTF3C1Q12789 2109 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 GCSAMLQ5JQS6 135 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 RHBDD2Q6NTF9 364 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 Q6ZS52 159 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 VAX2Q9UIW0 290 aa4.82□□□□□ -1.64
USF3-202ENST00000478658 TNS2Q63HR2 1409 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 COL14A1Q05707 1796 aaKnown RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 EDIL3O43854 480 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 FBXO45P0C2W1 286 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 MESP2Q0VG99 397 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 PCSK4Q6UW60 755 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 TMEM229BQ8NBD8 167 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 LGALS14Q8TCE9 139 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 VN1R1Q9GZP7 353 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 WNT6Q9Y6F9 365 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 LOC285556D6RIA3 1793 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 TRGV5A0A0B4J1U4 118 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 ZNF195O14628 629 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 EFSO43281 561 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 ALX3O95076 343 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 DUSP14O95147 198 aaKnown RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 TIMP1P01033 207 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 NTHL1P78549 312 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 CDK5R1Q15078 307 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 GAPTQ8N292 157 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 PAAF1Q9BRP4 392 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 MRPL32Q9BYC8 188 aaKnown RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 IFI27L2Q9H2X8 130 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 DTLQ9NZJ0 730 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 PXMP4Q9Y6I8 212 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 DDX60Q8IY21 1712 aaKnown RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 MED1Q15648 1581 aaPredicted RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 LEUTXA8MZ59 168 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 NAT1P18440 290 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 IL1RNP18510 177 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 CA6P23280 308 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 PDLIM4P50479 330 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 MRPS11P82912 194 aaKnown RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 RBM45Q8IUH3 476 aaKnown RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 BAHD1Q8TBE0 780 aaPredicted RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 KIR3DX1Q9H7L2 352 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 AUNIPQ9H7T9 357 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 ALKQ9UM73 1620 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 H7C2G1 150 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 HYPMO75409 117 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 CD74P04233 296 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 GLRXP35754 106 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 NXPH1P58417 271 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 PRICKLE4Q2TBC4 344 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 C4orf48Q5BLP8 95 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 NCMAPQ5T1S8 102 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 TREML2Q5T2D2 321 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 ZFAND6Q6FIF0 208 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 BHLHA9Q7RTU4 235 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 GPRIN1Q7Z2K8 1008 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 TDHQ8IZJ6 230 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 UMODL1-AS1Q8N2C9 162 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 PQLC3Q8N755 202 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 OR11H4Q8NGC9 324 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 OR4C3Q8NH37 302 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 HMGCLL1Q8TB92 370 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 MSL2Q9HCI7 577 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 NEURL4Q96JN8 1562 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 ARFGEF3Q5TH69 2177 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 hCG_38984A0A1B0GV85 526 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 TMEM238C9JI98 176 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 TMEM50AO95807 157 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 TNXAQ16473 311 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 FHL5Q5TD97 284 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 SDHAF4Q5VUM1 108 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 CLEC20AQ6ZU45 233 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 DCXRQ7Z4W1 244 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 RARRES2Q99969 163 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 DIRC3C9JPN6 131 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 PRKNO60260 465 aaPredicted RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 GZMBP10144 247 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 EGR2P11161 476 aaPredicted RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 SELENOPP49908 381 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 OR10J3Q5JRS4 329 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 TMEM123Q8N131 208 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 ZNF385AQ96PM9 386 aaKnown RBP4.81□□□□□ -1.64
USF3-202ENST00000478658 DUSP21Q9H596 190 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 SDK1Q7Z5N4 2213 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 AGFG2O95081 481 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 DCAF12L1Q5VU92 463 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 BAP18Q8IXM2 172 aa4.81□□□□□ -1.64
USF3-202ENST00000478658 ARAP2Q8WZ64 1704 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 TRAV34A0A0B4J273 112 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 CTSDP07339 412 aaPredicted RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 GPR6P46095 362 aaPredicted RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 DSCR9P59020 149 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms