RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	SOCS3	O14543	225 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	XKRY	O14609	159 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	SLC37A4	O43826	429 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	IGHV3-48	P01763	117 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	MMP7	P09237	267 aa	Predicted RBP	5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	MSN	P26038	577 aa	Known RBP	5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	PSMB9	P28065	219 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	PRR3	P79522	188 aa	Known RBP	5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	DEFA6	Q01524	100 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	TFDP3	Q5H9I0	405 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	C9orf64	Q5T6V5	341 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	CD200R1L	Q6Q8B3	271 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	LRRN1	Q6UXK5	716 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	KRTAP1-3	Q8IUG1	177 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	UBAC2	Q8NBM4	344 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	C22orf15	Q8WYQ4	148 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	ZNF501	Q96CX3	271 aa	Predicted RBP	5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	GALNT14	Q96FL9	552 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	ZNF778	Q96MU6	729 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	SMIM14	Q96QK8	99 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	ZNF184	Q99676	751 aa	Predicted RBP	5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	KIR2DL4	Q99706	377 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	LRRC61	Q9BV99	259 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	C19orf24	Q9BVV8	132 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	FGFBP2	Q9BYJ0	223 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	OR51B6	Q9H340	312 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	HEXA-AS1	Q9H8Q6	139 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	MED4	Q9NPJ6	270 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	DDIT4	Q9NX09	232 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	LRP4	O75096	1905 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	DOCK7	Q96N67	2140 aa		5.18	□□□□□ -1.58
LRCH3-215	ENST00000476664	C21orf140	B9A014	251 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664		F5H5T6	163 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664		H7C417	338 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	CXCR6	O00574	342 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	PHYH	O14832	338 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	SLC22A5	O76082	557 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	THY1	P04216	161 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	COX7A1	P24310	79 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	KIR3DL2	P43630	455 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	TTPA	P49638	278 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	IDH3G	P51553	393 aa	Predicted RBP	5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	RPS23	P62266	143 aa	Known RBP	5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	AES	Q08117	197 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	CLEC12B	Q2HXU8	276 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	TMEM176B	Q3YBM2	270 aa	Predicted RBP	5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	SPIN4	Q56A73	249 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	COA6	Q5JTJ3	125 aa	Known RBP	5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	AVPI1	Q5T686	147 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	MOB1B	Q7L9L4	216 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	GAPT	Q8N292	157 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	STK40	Q8N2I9	435 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	GPD1L	Q8N335	351 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	FAM71E2	Q8N5Q1	922 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	BLOC1S5	Q8TDH9	187 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	RNF138	Q8WVD3	245 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	RXFP2	Q8WXD0	754 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	TESC	Q96BS2	214 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	HAUS1	Q96CS2	278 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	ARHGDIG	Q99819	225 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	TMEM208	Q9BTX3	173 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	BCL2L14	Q9BZR8	327 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	SLIRP	Q9GZT3	109 aa	Known RBP	5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	SH2D2A	Q9NP31	389 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	MYOZ1	Q9NP98	299 aa	Predicted RBP	5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	C12orf4	Q9NQ89	552 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	DIABLO	Q9NR28	239 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	MTFP1	Q9UDX5	166 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	MOK	Q9UQ07	419 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	SNX10	Q9Y5X0	201 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664		V9GYQ6	96 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	HCFC1	P51610	2035 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664	VWF	P04275	2813 aa		5.17	□□□□□ -1.58
LRCH3-215	ENST00000476664		H3BQV1	296 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	DCTN3	O75935	186 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	BCHE	P06276	602 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	MRPL3	P09001	348 aa	Known RBP	5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	ZDHHC11B	P0C7U3	371 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	OMP	P47874	163 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	LSM6	P62312	80 aa	Known RBP	5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	GTF3C1	Q12789	2109 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	SPA17	Q15506	151 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	CASP12	Q6UXS9	341 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	AKAP14	Q86UN6	197 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	STOML3	Q8TAV4	291 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664		Q96MT0	163 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	ZNF599	Q96NL3	588 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	WFIKKN1	Q96NZ8	548 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	DHRS9	Q9BPW9	319 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	UGT2B28	Q9BY64	529 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	UBXN6	Q9BZV1	441 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	METTL9	Q9H1A3	318 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	TMEM27	Q9HBJ8	222 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	RBM22	Q9NW64	420 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	FAM206A	Q9NX38	181 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	PAQR5	Q9NXK6	330 aa	Predicted RBP	5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	TAS2R13	Q9NYV9	303 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	PIKFYVE	Q9Y2I7	2098 aa		5.16	□□□□□ -1.58
LRCH3-215	ENST00000476664	IGLV8-61	A0A075B6I0	122 aa		5.15	□□□□□ -1.59

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