RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 RPRD1BQ9NQG5 326 aaKnown RBP4.59□□□□□ -1.67
HDAC3-206ENST00000471968 CALYQ9NYX4 217 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 RIMS3Q9UJD0 308 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 IER3IP1Q9Y5U9 82 aa4.59□□□□□ -1.67
HDAC3-206ENST00000471968 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
HDAC3-206ENST00000471968 TMEM213A2RRL7 107 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 TVP23AA6NH52 213 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 ANKRD65E5RJM6 399 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 PLIN3O60664 434 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 MPZP25189 248 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 IL3RAP26951 378 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 VHLP40337 213 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 SLC15A1P46059 708 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 OR3A3P47888 321 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 LINC00315P59091 139 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 GRB2P62993 217 aaKnown RBP4.58□□□□□ -1.68
HDAC3-206ENST00000471968 GNGT1P63211 74 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 PLGLAQ15195 96 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF66Q6ZN08 573 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 CROCCP2Q86T23 111 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 NRMQ8IXM6 262 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 TCEANCQ8N8B7 351 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 FAM156AQ8NDB6 213 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 OR1L1Q8NH94 360 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 KCNG3Q8TAE7 436 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 SLAMF9Q96A28 289 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 COQ2Q96H96 371 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 CEP19Q96LK0 163 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 NMNAT3Q96T66 252 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 Q9H3A6 140 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 FBXL15Q9H469 300 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 MTCH1Q9NZJ7 389 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 CORO2BQ9UQ03 480 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 LINC00588Q9Y4M8 146 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 X6R8D5 127 aa4.58□□□□□ -1.68
HDAC3-206ENST00000471968 A0A087WTM6 91 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF320A2RRD8 509 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 C15orf61A6NNL5 157 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 PPP5D1E7EU14 171 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 M0QX08 132 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 CDC42EP2O14613 210 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 RGS16O15492 202 aaPredicted RBP4.57□□□□□ -1.68
HDAC3-206ENST00000471968 TXNL1O43396 289 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 TYROBPO43914 113 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 IL1AP01583 271 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 CALCBP10092 127 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 CLUP10909 449 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 HOXB9P17482 250 aaPredicted RBP4.57□□□□□ -1.68
HDAC3-206ENST00000471968 KRT4P19013 534 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 MAP2K3P46734 347 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 ATP1B3P54709 279 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 CCL18P55774 89 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 IL24Q13007 206 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 LSAMPQ13449 338 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 MED21Q13503 144 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 ATXN7L3Q14CW9 347 aaPredicted RBP4.57□□□□□ -1.68
HDAC3-206ENST00000471968 USF2Q15853 346 aaPredicted RBP4.57□□□□□ -1.68
HDAC3-206ENST00000471968 ZBED5Q49AG3 693 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF684Q5T5D7 378 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 METTL21CQ5VZV1 264 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 SLC16A12Q6ZSM3 486 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 KRT74Q7RTS7 529 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 C11orf65Q8NCR3 313 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 SETD9Q8NE22 299 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 NPBQ8NG41 125 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 MRGPRDQ8TDS7 321 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 USMG5Q96IX5 58 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 CLCC1Q96S66 551 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 NRIP3Q9NQ35 241 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 THAP1Q9NVV9 213 aa4.57□□□□□ -1.68
HDAC3-206ENST00000471968 PQLC2LA1A4F0 135 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF705EA8MWA4 302 aaPredicted RBP4.56□□□□□ -1.68
HDAC3-206ENST00000471968 NDUFA3O95167 84 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 OR2C1O95371 312 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 FAM107AO95990 144 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 NRASP01111 189 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 APOC1P02654 83 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 IL6P05231 212 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 CGB3P0DN86 165 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 CGB7P0DN87 165 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 TNFRSF1BP20333 461 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 MAP2K4P45985 399 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 RPS6KA3P51812 740 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 HNRNPA3P51991 378 aaKnown RBP4.56□□□□□ -1.68
HDAC3-206ENST00000471968 CDC42P60953 191 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 RIPK1Q13546 671 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 PCLAFQ15004 111 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 LCN1P1Q5VSP4 162 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF497Q6ZNH5 498 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 ENTHD1Q8IYW4 607 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF565Q8N9K5 539 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 DRAXINQ8NBI3 349 aaPredicted RBP4.56□□□□□ -1.68
HDAC3-206ENST00000471968 GRPEL2Q8TAA5 225 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 EPS8L3Q8TE67 593 aaKnown RBP4.56□□□□□ -1.68
HDAC3-206ENST00000471968 LZICQ8WZA0 190 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 ROPN1BQ9BZX4 212 aaPredicted RBP4.56□□□□□ -1.68
HDAC3-206ENST00000471968 ROPN1Q9HAT0 212 aaPredicted RBP4.56□□□□□ -1.68
HDAC3-206ENST00000471968 ZNF586Q9NXT0 402 aa4.56□□□□□ -1.68
HDAC3-206ENST00000471968 IGLV5-52A0A0A0MRZ9 124 aa4.55□□□□□ -1.68
HDAC3-206ENST00000471968 DHRS12A0PJE2 317 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms