RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 LOC105371267A0A1B0GV96 52 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR51F1A6NGY5 319 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 EPOPA6NHQ4 379 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 F5H768 121 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 UPK1BO75841 260 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 PTTG1O95997 202 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 C8orf88P0DMB2 117 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 THRAP10827 490 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 CD37P11049 281 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF35P13682 527 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 CD99P14209 185 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 FUT3P21217 361 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 HTR1EP28566 365 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 GRPRP30550 384 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 GNRHRP30968 328 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TGFBR2P37173 567 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 HSPA9P38646 679 aaKnown RBP2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 FABP6P51161 128 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 NCBP2P52298 156 aaKnown RBP eCLIP2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TCL1AP56279 114 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 IGLV3-21P80748 117 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 PTGES3Q15185 160 aaKnown RBP2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 QPRTQ15274 297 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 FCN2Q15485 313 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TAF1AQ15573 450 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 GUCA2BQ16661 112 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TBC1D28Q2M2D7 210 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 YIF1BQ5BJH7 314 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TFDP3Q5H9I0 405 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 BAIAP2L2Q6UXY1 529 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 NPSR1Q6W5P4 371 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TEX43Q6ZNM6 134 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF493Q6ZR52 646 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 RPS27LQ71UM5 84 aaKnown RBP2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 STRADAQ7RTN6 431 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM25Q86YD3 366 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 RAB43Q86YS6 212 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 CALHM1Q8IU99 346 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 CTAGE3PQ8IX95 158 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 STOML3Q8TAV4 291 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 NT5CQ8TCD5 201 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZFAND1Q8TCF1 268 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR5P2Q8WZ92 322 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TLCD1Q96CP7 247 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 DDIT4LQ96D03 193 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TCEAL4Q96EI5 215 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 IMP4Q96G21 291 aaKnown RBP2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 SMARCD1Q96GM5 515 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM101Q96IK0 257 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 BTF3L4Q96K17 158 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF681Q96N22 645 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 COL21A1Q96P44 957 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 RNF157Q96PX1 679 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR2M4Q96R27 311 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 DHRS9Q9BPW9 319 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 AGMATQ9BSE5 352 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 CDCA4Q9BXL8 241 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 MAP1LC3AQ9H492 121 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TRABDQ9H4I3 376 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 FAM96AQ9H5X1 160 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 PRORYQ9H606 182 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 C11orf49Q9H6J7 331 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 DIABLOQ9NR28 239 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM9Q9P0T7 183 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 NUFIP1Q9UHK0 495 aaKnown RBP2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 CSAG2Q9Y5P2 127 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 CHD7Q9P2D1 2997 aa2.72□□□□□ -1.97
HMGB1P25-201ENST00000468402 RALGAPA1Q6GYQ0 2036 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 CLUHO75153 1309 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 MN1Q10571 1320 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 TNRC18O15417 2968 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 TRAV8-4A0A0B4J246 113 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 A0A1B0GV72 72 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 FAM168BA1KXE4 195 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 NCBP2LA6PVI3 153 aaKnown RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 F5H5K5 113 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 H7C1H1 209 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 J3QLI3 93 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 K7EMT4 169 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 CXCR6O00574 342 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 PEX7O00628 323 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 CDIPTO14735 213 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 PHOX2AO14813 284 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 AZIN1O14977 448 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 BIRC5O15392 142 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 FGF16O43320 207 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 UGT2B11O75310 529 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 MPZL1O95297 269 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 P01737 135 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 HLA-DQB2P05538 268 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 GIG44P09565 113 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 SLC35G6P0C7Q6 338 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 IGHV3-43DP0DP04 118 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 ERGP11308 486 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 KLK2P20151 261 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 USF1P22415 310 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 GATA2P23769 480 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 PFN2P35080 140 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 RCVRNP35243 200 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 IFNGR2P38484 337 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms