RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 VMO1Q7Z5L0 202 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 OR10A7Q8NGE5 316 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 MRGPRDQ8TDS7 321 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 CYYR1Q96J86 154 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 PCGF1Q9BSM1 259 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 DCUN1D5Q9BTE7 237 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 RAB9BQ9NP90 201 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 CALYQ9NYX4 217 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 CDC42EP3Q9UKI2 254 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 TRAPPC2LQ9UL33 140 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
GPC1-207ENST00000466624 SONP18583 2426 aaKnown RBP13.11□□□□□ -0.31
GPC1-207ENST00000466624 NPIPB11E5RHQ5 1161 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 TPPPO94811 219 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 MELTFP08582 738 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 CD3GP09693 182 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 IGHV1-8P0DP01 117 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 ELK1P19419 428 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 MRPS15P82914 257 aaKnown RBP13.11□□□□□ -0.31
GPC1-207ENST00000466624 PITPNAQ00169 270 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 C17orf58Q2M2W7 97 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 TMEM30BQ3MIR4 351 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 HACD4Q5VWC8 232 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 OLFML2AQ68BL7 652 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 NCR3LG1Q68D85 454 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 OR4K15Q8NH41 348 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 MCFD2Q8NI22 146 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 NANPQ8TBE9 248 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 TNFRSF14Q92956 283 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
GPC1-207ENST00000466624 ADAM30Q9UKF2 790 aa13.11□□□□□ -0.31
GPC1-207ENST00000466624 TRAV18A0A075B6X5 111 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 MEX3AA1L020 520 aaKnown RBP13.1□□□□□ -0.31
GPC1-207ENST00000466624 C15orf65H3BRN8 121 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 MNDAP41218 407 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 BPIFB3P59826 476 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 SRSF7Q16629 238 aaKnown RBP eCLIP13.1□□□□□ -0.31
GPC1-207ENST00000466624 TMEM69Q5SWH9 247 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 OR52W1Q6IF63 320 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 CCDC107Q8WV48 283 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 MIXL1Q9H2W2 232 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 MMP27Q9H306 513 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 AUNIPQ9H7T9 357 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 HEXA-AS1Q9H8Q6 139 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 ZMAT3Q9HA38 289 aaKnown RBP13.1□□□□□ -0.31
GPC1-207ENST00000466624 SIRT7Q9NRC8 400 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 KCNIP1Q9NZI2 227 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 SESN1Q9Y6P5 492 aa13.1□□□□□ -0.31
GPC1-207ENST00000466624 A0A087X0M5 115 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 A0A1B0GX30 115 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 TMEM235A6NFC5 223 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 FAM25AB3EWG3 89 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 FAM25CB3EWG5 89 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 FAM25GB3EWG6 89 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 C12orf77C9JDV5 145 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 INAFM1C9JVW0 142 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 F2RL2O00254 374 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 CTDSP2O14595 271 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 RGS5O15539 181 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 HOXB4P17483 251 aaPredicted RBP13.09□□□□□ -0.31
GPC1-207ENST00000466624 RCC1P18754 421 aaPredicted RBP13.09□□□□□ -0.31
GPC1-207ENST00000466624 DTYMKP23919 212 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 SSTR5P35346 364 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 TAS2R20P59543 309 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 GUCA2AQ02747 115 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 ARFRP1Q13795 201 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 HMGN3Q15651 99 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 KLF17Q5JT82 389 aaPredicted RBP13.09□□□□□ -0.31
GPC1-207ENST00000466624 Q6ZPA2 131 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 Q6ZS49 121 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 Q71RC1 249 aaPredicted RBP13.09□□□□□ -0.31
GPC1-207ENST00000466624 OR52M1Q8NGK5 317 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 KIRREL1Q96J84 757 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 HDHD3Q9BSH5 251 aaPredicted RBP13.09□□□□□ -0.31
GPC1-207ENST00000466624 C6orf62Q9GZU0 229 aaPredicted RBP13.09□□□□□ -0.31
GPC1-207ENST00000466624 Q9N2K0 584 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 IDI2-AS1Q9NZ38 188 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 NAV3Q8IVL0 2385 aa13.09□□□□□ -0.31
GPC1-207ENST00000466624 TRAV39A0A0B4J263 110 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 TRAV40A0A0B4J280 105 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 CENPVL3A0A0U1RRI6 287 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 RNASEK-C17orf49H0YIS7 233 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 SPINT2O43291 252 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 FCGR3AP08637 254 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 FPR2P25090 351 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 CD34P28906 385 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 TALDO1P37837 337 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 UBE2E1P51965 193 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 GNG2P59768 71 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 PRAMEF5Q5TYX0 476 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 GPR157Q5UAW9 335 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 LAX1Q8IWV1 398 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 OR13D1Q8NGV5 346 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 ARL11Q969Q4 196 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 BEX2Q9BXY8 128 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 TMEM133Q9H2Q1 129 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 TAF9BQ9HBM6 251 aa13.08□□□□□ -0.32
GPC1-207ENST00000466624 RABL2AQ9UBK7 228 aaPredicted RBP13.08□□□□□ -0.32
GPC1-207ENST00000466624 ELF5Q9UKW6 265 aaPredicted RBP13.08□□□□□ -0.32
GPC1-207ENST00000466624 NUP50Q9UKX7 468 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms