RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CEACAM3P40198 252 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 GNG10P50151 68 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 IRF3Q14653 427 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 AWAT2Q6E213 333 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 UNQ9370/PRO34162Q6UXP9 181 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 CCDC107Q8WV48 283 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 CREB3L1Q96BA8 519 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 SLC25A33Q9BSK2 321 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 MND1Q9BWT6 205 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 TPRKBQ9Y3C4 175 aa17.4■□□□□ 0.38
LIME1-203ENST00000465591 SH2D7A6NKC9 451 aaPredicted RBP17.39■□□□□ 0.37
LIME1-203ENST00000465591 MT-ND4P03905 459 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 AMY1AP04745 511 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 AMY2AP04746 511 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 SLC35A2P78381 396 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 GPR176Q14439 515 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 ACSM3Q53FZ2 586 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 ZNF497Q6ZNH5 498 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 CDH26Q8IXH8 852 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 DTX3Q8N9I9 347 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 NEK7Q8TDX7 302 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 TMED9Q9BVK6 235 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 LIN7BQ9HAP6 207 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 PCDHB16Q9NRJ7 776 aa17.39■□□□□ 0.37
LIME1-203ENST00000465591 A0A1W2PPI3 338 aa17.38■□□□□ 0.37
LIME1-203ENST00000465591 DENRO43583 198 aaKnown RBP17.38■□□□□ 0.37
LIME1-203ENST00000465591 SPHARQ15513 63 aa17.38■□□□□ 0.37
LIME1-203ENST00000465591 SIGIRRQ6IA17 410 aa17.38■□□□□ 0.37
LIME1-203ENST00000465591 OR10A7Q8NGE5 316 aa17.38■□□□□ 0.37
LIME1-203ENST00000465591 MYDGFQ969H8 173 aa17.38■□□□□ 0.37
LIME1-203ENST00000465591 TOMM40LQ969M1 308 aa17.38■□□□□ 0.37
LIME1-203ENST00000465591 RPEQ96AT9 228 aa17.38■□□□□ 0.37
LIME1-203ENST00000465591 RBM14Q96PK6 669 aaKnown RBP17.38■□□□□ 0.37
LIME1-203ENST00000465591 SELENOIQ9C0D9 397 aa17.38■□□□□ 0.37
LIME1-203ENST00000465591 FAM90A18PA6NE21 464 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 FAM90A16PA6NEW6 464 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 FAM90A20PA6NIJ5 464 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 FAM90A9PA6NNJ1 464 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 FAM90A12PA8MX19 464 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 FAM90A5PA8MXJ8 464 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 OOSP1A8MZH6 123 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 FBXO24O75426 580 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 OR2F2O95006 317 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 FAM90A15PP0C7V4 464 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 FAM90A13PP0C7W8 464 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 FAM90A14PP0C7W9 464 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 FAM90A24PP0C7X0 464 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 MGMTP16455 207 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 MAPK3P27361 379 aaPredicted RBP17.37■□□□□ 0.37
LIME1-203ENST00000465591 VDAC2P45880 294 aaPredicted RBP17.37■□□□□ 0.37
LIME1-203ENST00000465591 RAB12Q6IQ22 244 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 C16orf82Q7Z2V1 217 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 LRRTM1Q86UE6 522 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 NKAIN3Q8N8D7 197 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 CAPSLQ8WWF8 208 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 ARL11Q969Q4 196 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 MRPS24Q96EL2 167 aaKnown RBP17.37■□□□□ 0.37
LIME1-203ENST00000465591 Q96M66 194 aa17.37■□□□□ 0.37
LIME1-203ENST00000465591 AMMECR1Q9Y4X0 333 aaPredicted RBP17.37■□□□□ 0.37
LIME1-203ENST00000465591 PRKDCP78527 4128 aaKnown RBP17.36■□□□□ 0.37
LIME1-203ENST00000465591 IGHV3-43A0A0B4J1X8 118 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 ADARB2-AS1A8MUL3 147 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 AIPO00170 330 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 CRTAPO75718 401 aaPredicted RBP17.36■□□□□ 0.37
LIME1-203ENST00000465591 SC5DO75845 299 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 IGHV3-43DP0DP04 118 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 GZMHP20718 246 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 MNDAP41218 407 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 ARHGDIBP52566 201 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 LOXL3P58215 753 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 MED22Q15528 200 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 ABCA11PQ4W5N1 156 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 ARSJQ5FYB0 599 aaPredicted RBP17.36■□□□□ 0.37
LIME1-203ENST00000465591 RBM48Q5RL73 367 aaKnown RBP17.36■□□□□ 0.37
LIME1-203ENST00000465591 CCDC144NLQ6NUI1 221 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 C1QL4Q86Z23 238 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 DRAM1Q8N682 238 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 OR56B4Q8NH76 319 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 FAM46BQ96A09 425 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 CITED2Q99967 270 aaPredicted RBP17.36■□□□□ 0.37
LIME1-203ENST00000465591 UQCC2Q9BRT2 126 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 DUSP21Q9H596 190 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 BLOC1S6Q9UL45 172 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 PEX16Q9Y5Y5 336 aa17.36■□□□□ 0.37
LIME1-203ENST00000465591 SNRNP70P08621 437 aaKnown RBP17.35■□□□□ 0.37
LIME1-203ENST00000465591 MADCAM1Q13477 382 aa17.35■□□□□ 0.37
LIME1-203ENST00000465591 NSUN5P1Q3KNT7 163 aa17.35■□□□□ 0.37
LIME1-203ENST00000465591 SLC16A12Q6ZSM3 486 aa17.35■□□□□ 0.37
LIME1-203ENST00000465591 GAPTQ8N292 157 aa17.35■□□□□ 0.37
LIME1-203ENST00000465591 MS4A15Q8N5U1 240 aa17.35■□□□□ 0.37
LIME1-203ENST00000465591 OR4K15Q8NH41 348 aa17.35■□□□□ 0.37
LIME1-203ENST00000465591 THRSPQ92748 146 aa17.35■□□□□ 0.37
LIME1-203ENST00000465591 SPACA1Q9HBV2 294 aa17.35■□□□□ 0.37
LIME1-203ENST00000465591 GFOD1Q9NXC2 390 aa17.35■□□□□ 0.37
LIME1-203ENST00000465591 ETAA1Q9NY74 926 aa17.35■□□□□ 0.37
LIME1-203ENST00000465591 C12orf77C9JDV5 145 aa17.34■□□□□ 0.37
LIME1-203ENST00000465591 MCRIP1C9JLW8 97 aa17.34■□□□□ 0.37
LIME1-203ENST00000465591 SDCBPO00560 298 aaPredicted RBP17.34■□□□□ 0.37
LIME1-203ENST00000465591 ORC5O43913 435 aa17.34■□□□□ 0.37
LIME1-203ENST00000465591 LPLP06858 475 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms