RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 TREML4Q6UXN2 200 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 TMEM104Q8NE00 496 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 OR9G1Q8NH87 305 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 TAF15Q92804 592 aaKnown RBP eCLIP12.09□□□□□ -0.47
ATG4B-213ENST00000460211 FAM46BQ96A09 425 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 KIRREL1Q96J84 757 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 Q96M66 194 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 NEDD4LQ96PU5 975 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 LINC00574Q9H8X3 128 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 ETAA1Q9NY74 926 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 ZNF581Q9P0T4 197 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 RCC2Q9P258 522 aaKnown RBP12.09□□□□□ -0.47
ATG4B-213ENST00000460211 TRAPPC2LQ9UL33 140 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 HILPDAQ9Y5L2 63 aa12.09□□□□□ -0.47
ATG4B-213ENST00000460211 AIPO00170 330 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 PDCD5O14737 125 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 SLC22A1O15245 554 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 BPNT1O95861 308 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 MT-ND4P03905 459 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 CD37P11049 281 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 RELBQ01201 579 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 PLA1AQ53H76 456 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 ZNF497Q6ZNH5 498 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 SLC16A12Q6ZSM3 486 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 SPARTQ8N0X7 666 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 OR4P4Q8NGL7 312 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 RFESDQ8TAC1 157 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 TMEM59Q9BXS4 323 aa12.08□□□□□ -0.48
ATG4B-213ENST00000460211 AK6Q9Y3D8 172 aaKnown RBP12.08□□□□□ -0.48
ATG4B-213ENST00000460211 AMMECR1Q9Y4X0 333 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-213ENST00000460211 CMYA5Q8N3K9 4069 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 FAM172BPA6NC97 362 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 NPIPB11E5RHQ5 1161 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 F2RL2O00254 374 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 CCRL2O00421 344 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 ORC5O43913 435 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 PDCD6O75340 191 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 VSIG8P0DPA2 414 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 ARSBP15848 533 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 GALP22466 123 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 MYL9P24844 172 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 PAX6P26367 422 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 PSMB9P28065 219 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 BRS3P32247 399 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 GDNFP39905 211 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 DYNLT3P51808 116 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 RAB11BQ15907 218 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 LTC4SQ16873 150 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 HLA-DRB5Q30154 266 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 C6orf183Q5T699 404 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 UBE2UQ5VVX9 321 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 TRAT1Q6PIZ9 186 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 BAIAP2L2Q6UXY1 529 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 CCDC107Q8WV48 283 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 ARL11Q969Q4 196 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 URM1Q9BTM9 101 aaKnown RBP12.07□□□□□ -0.48
ATG4B-213ENST00000460211 NPFFR1Q9GZQ6 430 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 ZNF286AQ9HBT8 521 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 NDUFB11Q9NX14 153 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 RNF114Q9Y508 228 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 V9GY05 133 aa12.07□□□□□ -0.48
ATG4B-213ENST00000460211 TRAV39A0A0B4J263 110 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 TRDV1A0A1B0GX56 115 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 OOSP1A8MZH6 123 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 BUB1B-PAK6H3BSN5 160 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 SLC17A2O00624 439 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 SPINT2O43291 252 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 TSPAN9O75954 239 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 IGLV1-47P01700 117 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 SSTR5P35346 364 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 MNDAP41218 407 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 RAB13P51153 203 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 RPS27AP62979 156 aaKnown RBP12.06□□□□□ -0.48
ATG4B-213ENST00000460211 SSX1Q16384 188 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 NKAPLQ5M9Q1 402 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 LDLRAD2Q5SZI1 272 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 SYT6Q5T7P8 510 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-213ENST00000460211 CCDC144NLQ6NUI1 221 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 ZNF773Q6PK81 442 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 Q6ZSV7 163 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 OR2W3Q7Z3T1 314 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 DYNAPQ8N1N2 210 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 OR4C13Q8NGP0 309 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 LINC01006Q8NI28 216 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 PIFOQ8TCI5 191 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 MMP28Q9H239 520 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 C16orf95Q9H693 158 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 KCNIP1Q9NZI2 227 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 TCF19Q9Y242 345 aa12.06□□□□□ -0.48
ATG4B-213ENST00000460211 TRAV1-2A0A0B4J238 106 aa12.05□□□□□ -0.48
ATG4B-213ENST00000460211 UBE2QL1A1L167 161 aa12.05□□□□□ -0.48
ATG4B-213ENST00000460211 J3QR06 171 aa12.05□□□□□ -0.48
ATG4B-213ENST00000460211 P2RY14Q15391 338 aa12.05□□□□□ -0.48
ATG4B-213ENST00000460211 TMEM30BQ3MIR4 351 aa12.05□□□□□ -0.48
ATG4B-213ENST00000460211 OR10K2Q6IF99 312 aa12.05□□□□□ -0.48
ATG4B-213ENST00000460211 CD200R1LQ6Q8B3 271 aa12.05□□□□□ -0.48
ATG4B-213ENST00000460211 OR52M1Q8NGK5 317 aa12.05□□□□□ -0.48
ATG4B-213ENST00000460211 CAPSLQ8WWF8 208 aa12.05□□□□□ -0.48
ATG4B-213ENST00000460211 RPEQ96AT9 228 aa12.05□□□□□ -0.48
ATG4B-213ENST00000460211 TM2D1Q9BX74 207 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms