RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 FKBP6O75344 327 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 RPP14O95059 124 aaKnown RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 NXPH2O95156 264 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 SLC2A10O95528 541 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 IGHG4P01861 327 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 C1QCP02747 245 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 MT1HL1P0DM35 61 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 SLC2A1P11166 492 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 LAMP1P11279 417 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 ETFAP13804 333 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 MUC1P15941 1255 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 CA6P23280 308 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 PSMB8P28062 276 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 DDOSTP39656 456 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 SLC1A6P48664 564 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 AQP4P55087 323 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 HBA1P69905 142 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 ENDOGQ14249 297 aaKnown RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 TAF13Q15543 124 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 OR8G1Q15617 311 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 ANXA2RQ3ZCQ2 193 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 UNC50Q53HI1 259 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 LBHQ53QV2 105 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 ATPAF1Q5TC12 328 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 RPL13AP3Q6NVV1 102 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 TNFAIP8L2Q6P589 184 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 IL34Q6ZMJ4 242 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 SLC35D2Q76EJ3 337 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 C6orf120Q7Z4R8 191 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 SERPINA11Q86U17 422 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 GID4Q8IVV7 300 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 CTAGE3PQ8IX95 158 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 ZNF440Q8IYI8 595 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 PGAM4Q8N0Y7 254 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 C5orf56Q8N8D9 126 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 ZNRF1Q8ND25 227 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 SETD9Q8NE22 299 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 NOXO1Q8NFA2 376 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 MYOZ3Q8TDC0 251 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 LRRC29Q8WV35 223 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 DNAJA4Q8WW22 397 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 MAFIPQ8WZ33 124 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 BSCL2Q96G97 398 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 RNF170Q96K19 258 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 UBE2E2Q96LR5 201 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 PFDN5Q99471 154 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 SPXQ9BT56 116 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 MND1Q9BWT6 205 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 CADM1Q9BY67 442 aaKnown RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 MRPL13Q9BYD1 178 aaKnown RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 OR51J1Q9H342 316 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 GAL3ST2Q9H3Q3 398 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 KAT8Q9H7Z6 458 aaKnown RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 NIT2Q9NQR4 276 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 SAR1AQ9NR31 198 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 PLSCR3Q9NRY6 295 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 HHLA2Q9UM44 414 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 KCNK7Q9Y2U2 307 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 MOB4Q9Y3A3 225 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 PUS1Q9Y606 427 aaKnown RBP eCLIP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 HSPE1-MOB4S4R3N1 261 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 V9GYQ6 96 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 RNF103-CHMP3A0A140T963 221 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ZNF320A2RRD8 509 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 C9orf170A2RU37 121 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 C5orf51A6NDU8 294 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 PGPEP1LA6NFU8 196 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 OR2AT4A6NND4 320 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 E7ESA3 106 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 EIF3GO75821 320 aaKnown RBP eCLIP3.55□□□□□ -1.84
SDCBP-205ENST00000447267 CIB2O75838 187 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 GATBO75879 557 aaKnown RBP3.55□□□□□ -1.84
SDCBP-205ENST00000447267 SLC22A5O76082 557 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 IFNA21P01568 189 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 IFNA17P01571 189 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 CST2P09228 141 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 LINC00614P0C842 121 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 COX4I1P13073 169 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 NCK1P16333 377 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ZP3P21754 424 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 BRS3P32247 399 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 SPRP35270 261 aaPredicted RBP3.55□□□□□ -1.84
SDCBP-205ENST00000447267 SOAT1P35610 550 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 CDKN2CP42773 168 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 GPR4P46093 362 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 CDC34P49427 236 aaPredicted RBP3.55□□□□□ -1.84
SDCBP-205ENST00000447267 PPP5CP53041 499 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 PKNOX1P55347 436 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 CAV3P56539 151 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ACTBP60709 375 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ABCE1P61221 599 aaKnown RBP3.55□□□□□ -1.84
SDCBP-205ENST00000447267 PSME3P61289 254 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ESRRGP62508 458 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ACTA2P62736 377 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ACTG2P63267 376 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ACTC1P68032 377 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 ACTA1P68133 377 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 HOXC5Q00444 222 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 SYPL1Q16563 259 aa3.55□□□□□ -1.84
SDCBP-205ENST00000447267 IMPG1Q17R60 797 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms