RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 IGHV4-30-2A0A087WSY4 118 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 A0A087WUU8 490 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TSPAN11A1L157 253 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TLCD2A6NGC4 264 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 CPSF4LA6NMK7 179 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 FAM166BA8MTA8 275 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 IQCF5A8MTL0 148 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 EEF1E1-BLOC1S5C9J1V9 151 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 FTCDNL1E5RQL4 147 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 CLDN34H7C241 214 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 K7ERU9 68 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 HMGN4O00479 90 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 CHEK1O14757 476 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 HCRTO43612 131 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 CTAG2O75638 210 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TXNDC12O95881 172 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 IFNA21P01568 189 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 CD3DP04234 171 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 LGALS2P05162 132 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ERCC1P07992 297 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 MRPL3P09001 348 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 SNRPCP09234 159 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR8U9P0C7N5 309 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 SLC35G4P0C7Q5 338 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 FOLR1P15328 257 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 MSR1P21757 451 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZBTB25P24278 435 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR10J1P30954 320 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 AKR1C3P42330 323 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 GABRA4P48169 554 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 RPS20P60866 119 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 RHOAP61586 193 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ARF6P62330 175 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TRA2BP62995 288 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 MRPS11P82912 194 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 RPL19P84098 196 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 BEX3Q00994 111 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 PAX5Q02548 391 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 PRDX4Q13162 271 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 RIGQ13278 110 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 EIF4EBP2Q13542 120 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR5I1Q13606 314 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 HERPUD1Q15011 391 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 EBPQ15125 230 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TMEM241Q24JQ0 296 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 MS4A18Q3C1V0 323 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 PDZD11Q5EBL8 140 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 CYB5R2Q6BCY4 276 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 SLC25A24Q6NUK1 477 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 DPPA3Q6W0C5 159 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 PAQR9Q6ZVX9 377 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TGIF2LYQ8IUE0 185 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 NRMQ8IXM6 262 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 C9orf40Q8IXQ3 194 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF619Q8N2I2 560 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR2L13Q8N349 312 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZSCAN4Q8NAM6 433 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 Q8NBF4 154 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 C17orf47Q8NEP4 570 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 BBS1Q8NFJ9 593 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR4B1Q8NGF8 309 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR56B2PQ8NGI1 322 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR8S1Q8NH09 359 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR2L2Q8NH16 312 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 LYPD6BQ8NI32 183 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 GPX8Q8TED1 209 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 CASTOR1Q8WTX7 329 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ORAOV1Q8WV07 137 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TNFRSF14Q92956 283 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TMEM159Q96B96 161 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF707Q96C28 371 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TM4SF18Q96CE8 201 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 MS4A6EQ96DS6 147 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 MRPL53Q96EL3 112 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TGM7Q96PF1 710 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 OR5B12Q96R08 314 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF649Q9BS31 505 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 C20orf24Q9BUV8 137 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 SNHG12Q9BXW3 62 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 SELENOIQ9C0D9 397 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 CST11Q9H112 138 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 SLC26A1Q9H2B4 701 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 PLEKHA3Q9HB20 300 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ADAP2Q9NPF8 381 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 CBLN4Q9NTU7 201 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TMEM242Q9NWH2 141 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TECRQ9NZ01 308 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 IL17CQ9P0M4 197 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 VAX2Q9UIW0 290 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 ZNF223Q9UK11 482 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 MRPS33Q9Y291 106 aaKnown RBP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 PUS1Q9Y606 427 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 PLXND1Q9Y4D7 1925 aa3.62□□□□□ -1.83
HMGB1P16-201ENST00000447155 TRBV24-1A0A075B6N3 115 aa3.61□□□□□ -1.83
HMGB1P16-201ENST00000447155 TRAV39A0A0B4J263 110 aa3.61□□□□□ -1.83
HMGB1P16-201ENST00000447155 PIGBOS1A0A0B4J2F0 54 aa3.61□□□□□ -1.83
HMGB1P16-201ENST00000447155 TRBV11-1A0A0K0K1C0 115 aa3.61□□□□□ -1.83
HMGB1P16-201ENST00000447155 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
HMGB1P16-201ENST00000447155 H7C423 109 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms