RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 OGG1O15527 345 aa16.67■□□□□ 0.26
VSX1-206ENST00000444511 FGF16O43320 207 aa16.67■□□□□ 0.26
VSX1-206ENST00000444511 ZNF780AO75290 641 aaPredicted RBP16.67■□□□□ 0.26
VSX1-206ENST00000444511 DUS4LO95620 317 aaKnown RBP16.67■□□□□ 0.26
VSX1-206ENST00000444511 MPV17LQ2QL34 196 aa16.67■□□□□ 0.26
VSX1-206ENST00000444511 OR13C5Q8NGS8 318 aa16.67■□□□□ 0.26
VSX1-206ENST00000444511 CHPT1Q8WUD6 406 aa16.67■□□□□ 0.26
VSX1-206ENST00000444511 ARL11Q969Q4 196 aa16.67■□□□□ 0.26
VSX1-206ENST00000444511 ZNF184Q99676 751 aaPredicted RBP16.67■□□□□ 0.26
VSX1-206ENST00000444511 CHCHD3Q9NX63 227 aaKnown RBP16.67■□□□□ 0.26
VSX1-206ENST00000444511 CKLFQ9UBR5 152 aa16.67■□□□□ 0.26
VSX1-206ENST00000444511 DIMT1Q9UNQ2 313 aaKnown RBP16.67■□□□□ 0.26
VSX1-206ENST00000444511 CCRL2O00421 344 aa16.66■□□□□ 0.26
VSX1-206ENST00000444511 SDCBPO00560 298 aaPredicted RBP16.66■□□□□ 0.26
VSX1-206ENST00000444511 GAPDHP04406 335 aaKnown RBP16.66■□□□□ 0.26
VSX1-206ENST00000444511 GTF2F2P13984 249 aa16.66■□□□□ 0.26
VSX1-206ENST00000444511 MED21Q13503 144 aa16.66■□□□□ 0.26
VSX1-206ENST00000444511 SLC22A6Q4U2R8 563 aa16.66■□□□□ 0.26
VSX1-206ENST00000444511 MOB3BQ86TA1 216 aa16.66■□□□□ 0.26
VSX1-206ENST00000444511 OR51D1Q8NGF3 324 aa16.66■□□□□ 0.26
VSX1-206ENST00000444511 CCDC107Q8WV48 283 aa16.66■□□□□ 0.26
VSX1-206ENST00000444511 GHSRQ92847 366 aa16.66■□□□□ 0.26
VSX1-206ENST00000444511 NOL4LQ96MY1 436 aaPredicted RBP16.66■□□□□ 0.26
VSX1-206ENST00000444511 LALBAP00709 142 aa16.65■□□□□ 0.26
VSX1-206ENST00000444511 REG1BP48304 166 aa16.65■□□□□ 0.26
VSX1-206ENST00000444511 ZNF816Q0VGE8 651 aaPredicted RBP16.65■□□□□ 0.26
VSX1-206ENST00000444511 SLC35E3Q7Z769 313 aa16.65■□□□□ 0.26
VSX1-206ENST00000444511 STX19Q8N4C7 294 aa16.65■□□□□ 0.26
VSX1-206ENST00000444511 OR52M1Q8NGK5 317 aa16.65■□□□□ 0.26
VSX1-206ENST00000444511 UBALD1Q8TB05 177 aa16.65■□□□□ 0.26
VSX1-206ENST00000444511 CYGBQ8WWM9 190 aa16.65■□□□□ 0.26
VSX1-206ENST00000444511 TMEM80Q96HE8 168 aa16.65■□□□□ 0.26
VSX1-206ENST00000444511 CLEC2DQ9UHP7 191 aa16.65■□□□□ 0.26
VSX1-206ENST00000444511 IGHV1-3A0A0C4DH29 117 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 TRBV5-5A0A0J9YX44 114 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 A0A1W2PP11 408 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 C15orf65H3BRN8 121 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 EBAG9O00559 213 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 IGFBP3P17936 291 aaPredicted RBP16.64■□□□□ 0.25
VSX1-206ENST00000444511 RPL23AP62750 156 aaKnown RBP16.64■□□□□ 0.25
VSX1-206ENST00000444511 SLC35B1P78383 322 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 GPR176Q14439 515 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 Q499Y3 187 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 YIF1BQ5BJH7 314 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 DMKNQ6E0U4 476 aaPredicted RBP16.64■□□□□ 0.25
VSX1-206ENST00000444511 FOXRED2Q8IWF2 684 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 LINC00482Q8N8I6 264 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 SPACA1Q9HBV2 294 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 LINC00527Q9UJ94 153 aa16.64■□□□□ 0.25
VSX1-206ENST00000444511 IGHV3-72A0A0B4J1Y9 119 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 NCBP2LA6PVI3 153 aaKnown RBP16.63■□□□□ 0.25
VSX1-206ENST00000444511 NUDT19A8MXV4 375 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 AIPO00170 330 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 ORC5O43913 435 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 IGHG2P01859 326 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 MT-ND4P03905 459 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 IL3RAP26951 378 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 TTC23Q5W5X9 447 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 ZNF497Q6ZNH5 498 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 OR2W3Q7Z3T1 314 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 MRPL41Q8IXM3 137 aaKnown RBP16.63■□□□□ 0.25
VSX1-206ENST00000444511 JAGN1Q8N5M9 183 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 LINC00311Q8N616 119 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 ZFP41Q8N8Y5 198 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 SETD9Q8NE22 299 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 EAF1Q96JC9 268 aaPredicted RBP16.63■□□□□ 0.25
VSX1-206ENST00000444511 GPR61Q9BZJ8 451 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 GFOD1Q9NXC2 390 aa16.63■□□□□ 0.25
VSX1-206ENST00000444511 TRAV8-7A0A075B6U6 113 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 IGHV3-43A0A0B4J1X8 118 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 MAGEA13PA6NCF6 341 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 K7EIL1 84 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 GPX5O75715 221 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 IGHV3-43DP0DP04 118 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 EBI3Q14213 229 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 LRRC36Q1X8D7 754 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 ETV3LQ6ZN32 361 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 IZUMO1Q8IYV9 350 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 COMMD1Q8N668 190 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 C8orf31Q8N9H6 132 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 OR2T10Q8NGZ9 312 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 DPF1Q92782 380 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 MUL1Q969V5 352 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 ZFP57Q9NU63 452 aa16.62■□□□□ 0.25
VSX1-206ENST00000444511 MRPS28Q9Y2Q9 187 aaKnown RBP16.62■□□□□ 0.25
VSX1-206ENST00000444511 MCRIP1C9JLW8 97 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 FSTP19883 344 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 SLC6A1P30531 599 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 HOXD3P31249 432 aaPredicted RBP16.61■□□□□ 0.25
VSX1-206ENST00000444511 THBS3P49746 956 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 KRTAP10-11P60412 298 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 RPS11P62280 158 aaKnown RBP eCLIP16.61■□□□□ 0.25
VSX1-206ENST00000444511 GLIPR1L1Q6UWM5 242 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 TGIF2LXQ8IUE1 241 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 STPG2Q8N412 459 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 MRPS24Q96EL2 167 aaKnown RBP16.61■□□□□ 0.25
VSX1-206ENST00000444511 PGLYRP3Q96LB9 341 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 OR14A2Q96R54 314 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 RAB9BQ9NP90 201 aa16.61■□□□□ 0.25
VSX1-206ENST00000444511 TRAPPC2LQ9UL33 140 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms