RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 LINC00596Q86U02 117 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 OR52N1Q8NH53 320 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 TMEM106AQ96A25 262 aa16.39■□□□□ 0.21
CPNE1-219ENST00000440240 TRAV39A0A0B4J263 110 aa16.38■□□□□ 0.21
CPNE1-219ENST00000440240 TMEM30CPA0ZSE6 113 aa16.38■□□□□ 0.21
CPNE1-219ENST00000440240 ZNF780AO75290 641 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-219ENST00000440240 ZNF93P35789 620 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-219ENST00000440240 RBM11P57052 281 aaKnown RBP16.38■□□□□ 0.21
CPNE1-219ENST00000440240 UNQ9370/PRO34162Q6UXP9 181 aa16.38■□□□□ 0.21
CPNE1-219ENST00000440240 TMPRSS11AQ6ZMR5 421 aa16.38■□□□□ 0.21
CPNE1-219ENST00000440240 TGIF2LXQ8IUE1 241 aa16.38■□□□□ 0.21
CPNE1-219ENST00000440240 RGP1Q92546 391 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-219ENST00000440240 ARL11Q969Q4 196 aa16.38■□□□□ 0.21
CPNE1-219ENST00000440240 SLC29A1Q99808 456 aa16.38■□□□□ 0.21
CPNE1-219ENST00000440240 GON7Q9BXV9 100 aa16.38■□□□□ 0.21
CPNE1-219ENST00000440240 FGF20Q9NP95 211 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-219ENST00000440240 LINC00527Q9UJ94 153 aa16.38■□□□□ 0.21
CPNE1-219ENST00000440240 COL7A1Q02388 2944 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 IGHV1-3A0A0C4DH29 117 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 A0A1W2PPE3 182 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 NCBP2LA6PVI3 153 aaKnown RBP16.37■□□□□ 0.21
CPNE1-219ENST00000440240 DCKP27707 260 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 DCTN2Q13561 401 aaKnown RBP16.37■□□□□ 0.21
CPNE1-219ENST00000440240 MPV17LQ2QL34 196 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 DDI2Q5TDH0 399 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 TEX38Q6PEX7 206 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 C8orf86Q6ZUL3 223 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 ZNF695Q8IW36 515 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 STPG2Q8N412 459 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 LINC00311Q8N616 119 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 C8orf31Q8N9H6 132 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 OR2T10Q8NGZ9 312 aa16.37■□□□□ 0.21
CPNE1-219ENST00000440240 EAF1Q96JC9 268 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-219ENST00000440240 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.37■□□□□ 0.211e-7■■■■□ 24.8
CPNE1-219ENST00000440240 AP4M1O00189 453 aa16.36■□□□□ 0.21
CPNE1-219ENST00000440240 SDCBPO00560 298 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-219ENST00000440240 GEMIN2O14893 280 aaKnown RBP16.36■□□□□ 0.21
CPNE1-219ENST00000440240 ORC5O43913 435 aa16.36■□□□□ 0.21
CPNE1-219ENST00000440240 BDKRB2P30411 391 aa16.36■□□□□ 0.21
CPNE1-219ENST00000440240 KLHL30-AS1Q8NEE0 82 aa16.36■□□□□ 0.21
CPNE1-219ENST00000440240 APH1BQ8WW43 257 aa16.36■□□□□ 0.21
CPNE1-219ENST00000440240 P2RX4Q99571 388 aa16.36■□□□□ 0.21
CPNE1-219ENST00000440240 LIN7CQ9NUP9 197 aaKnown RBP16.36■□□□□ 0.21
CPNE1-219ENST00000440240 TENM3Q9P273 2699 aa16.36■□□□□ 0.21
CPNE1-219ENST00000440240 C15orf65H3BRN8 121 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 GTF2F2P13984 249 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 IL3RAP26951 378 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 REG1BP48304 166 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 GP2P55259 537 aaKnown RBP16.35■□□□□ 0.21
CPNE1-219ENST00000440240 CD69Q07108 199 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 GPR176Q14439 515 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 PNLIPRP3Q17RR3 467 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 Q3ZCU0 254 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 ATAD3CQ5T2N8 411 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 XAF1Q6GPH4 301 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 IZUMO1Q8IYV9 350 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 STX19Q8N4C7 294 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 NEK7Q8TDX7 302 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 ABCG5Q9H222 651 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 BABAM2Q9NXR7 383 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 ZNF581Q9P0T4 197 aa16.35■□□□□ 0.21
CPNE1-219ENST00000440240 IGHV3-72A0A0B4J1Y9 119 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 IRGMA1A4Y4 181 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 OGG1O15527 345 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 MT-ND4P03905 459 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 SERPINA2P20848 420 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 CD1BP29016 333 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 ETV1P50549 477 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 C18orf65Q6ZTR6 163 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 ZNF555Q8NEP9 628 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 CCDC107Q8WV48 283 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 SPACA1Q9HBV2 294 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 RAB9BQ9NP90 201 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 GFOD1Q9NXC2 390 aa16.34■□□□□ 0.21
CPNE1-219ENST00000440240 LINC01548A6NM66 108 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 GPR12P47775 334 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 RIPK1Q13546 671 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 SLC22A6Q4U2R8 563 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 OR2G6Q5TZ20 316 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 C11orf87Q6NUJ2 197 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 ZNF497Q6ZNH5 498 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 Q8N6K4 173 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 OR8H1Q8NGG4 311 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 RTN4IP1Q8WWV3 396 aaPredicted RBP16.33■□□□□ 0.2
CPNE1-219ENST00000440240 ST6GALNAC6Q969X2 333 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 SMIM19Q96E16 107 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 ZNF184Q99676 751 aaPredicted RBP16.33■□□□□ 0.2
CPNE1-219ENST00000440240 B9D2Q9BPU9 175 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 S100A14Q9HCY8 104 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 CKLFQ9UBR5 152 aa16.33■□□□□ 0.2
CPNE1-219ENST00000440240 H0YHG0 523 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 AIPO00170 330 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 CCL24O00175 119 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 RRP9O43818 475 aaKnown RBP16.32■□□□□ 0.2
CPNE1-219ENST00000440240 WBP4O75554 376 aaKnown RBP16.32■□□□□ 0.2
CPNE1-219ENST00000440240 GPX5O75715 221 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 MOSP00540 346 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 MYL12AP19105 171 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 SMN1Q16637 294 aaKnown RBP16.32■□□□□ 0.2
CPNE1-219ENST00000440240 CXorf66Q5JRM2 361 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms