RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 RNF115Q9Y4L5 304 aa3.34□□□□□ -1.87
HMGB1P37-201ENST00000439613 WIPI2Q9Y4P8 454 aa3.34□□□□□ -1.87
HMGB1P37-201ENST00000439613 NPTNQ9Y639 398 aa3.34□□□□□ -1.87
HMGB1P37-201ENST00000439613 SPTAN1Q13813 2472 aaKnown RBP3.34□□□□□ -1.88
HMGB1P37-201ENST00000439613 DOPEY1Q5JWR5 2465 aa3.34□□□□□ -1.88
HMGB1P37-201ENST00000439613 LRRK2Q5S007 2527 aa3.34□□□□□ -1.88
HMGB1P37-201ENST00000439613 USP9XQ93008 2570 aaPredicted RBP3.34□□□□□ -1.88
HMGB1P37-201ENST00000439613 KIAA2026Q5HYC2 2103 aa3.34□□□□□ -1.88
HMGB1P37-201ENST00000439613 ARFGEF3Q5TH69 2177 aa3.34□□□□□ -1.88
HMGB1P37-201ENST00000439613 MAP1AP78559 2803 aaPredicted RBP3.34□□□□□ -1.88
HMGB1P37-201ENST00000439613 DCHS2Q6V1P9 2916 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF462Q96JM2 2506 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 MEIKINA0A087WXM9 373 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 A0A0B4J2A0 478 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 PIGBOS1A0A0B4J2F0 54 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 FAM172BPA6NC97 362 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 C17orf100A8MU93 164 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 SRRM5B3KS81 715 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 NPIPB11E5RHQ5 1161 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 E7EQL1 145 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 SIRPB1O00241 398 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 SLC33A1O00400 549 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 SDCBPO00560 298 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 FABP7O15540 132 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 SPRY3O43610 288 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 GOSR1O95249 250 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 DUS4LO95620 317 aaKnown RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR4E1P0C645 316 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF728P0DKX0 622 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 VSIG10L2P0DP72 767 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ANXA3P12429 323 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 PGAM2P15259 253 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ANXA7P20073 488 aaKnown RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 GNLYP22749 145 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZBTB25P24278 435 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 S100GP29377 79 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 FCGR2CP31995 323 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 PRDX2P32119 198 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 EIF2B2P49770 351 aaKnown RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 NPY4RP50391 375 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 UCP3P55916 312 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 RAP2BP61225 183 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 SNRPD2P62316 118 aaKnown RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 IL13RA1P78552 427 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 CD83Q01151 205 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 DHODHQ02127 395 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 TLE1Q04724 770 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 TFF3Q07654 80 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 DAZAP2Q15038 168 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 PDCD1Q15116 288 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 FCN2Q15485 313 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 MPPED2Q15777 294 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZFP69Q49AA0 526 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ABCA11PQ4W5N1 156 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM128Q5BJH2 165 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 C6orf183Q5T699 404 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 PRAMEF6Q5VXH4 476 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF626Q68DY1 528 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF660Q6AZW8 331 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 LIN54Q6MZP7 749 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ADAM5Q6NVV9 412 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF880Q6PDB4 577 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 TRAT1Q6PIZ9 186 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF826PQ6ZT77 177 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 LYG2Q86SG7 212 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 RTN4RL2Q86UN3 420 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 C1QL4Q86Z23 238 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 SLC38A6Q8IZM9 456 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 FAM185AQ8N0U4 392 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 C12orf45Q8N5I9 185 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 LINC01356Q8N9X3 169 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 CCDC71LQ8N9Z2 235 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 CLRN3Q8NCR9 226 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR5D13Q8NGL4 314 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR13C8Q8NGS7 320 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 OR10J5Q8NHC4 309 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 LINC01560Q8TB33 94 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 MRPL30Q8TCC3 161 aaKnown RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 MARCH1Q8TCQ1 289 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ITLN1Q8WWA0 313 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 MAFIPQ8WZ33 124 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 PIK3IP1Q96FE7 263 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF486Q96H40 463 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ST6GAL2Q96JF0 529 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 PHB2Q99623 299 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 VRK1Q99986 396 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF2Q9BSG1 426 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 HDHD3Q9BSH5 251 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM204Q9BSN7 226 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 ZNF436Q9C0F3 470 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 DNTTIP1Q9H147 329 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 WDR13Q9H1Z4 485 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 NCOR1P1Q9H4R4 102 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 RANBP3Q9H6Z4 567 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 TMEM165Q9HC07 324 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 DYNLRB1Q9NP97 96 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 DLL4Q9NR61 685 aa3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 CISD1Q9NZ45 108 aaKnown RBP3.33□□□□□ -1.88
HMGB1P37-201ENST00000439613 IL36RNQ9UBH0 155 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms