RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 BANF2Q9H503 90 aa7.41□□□□□ -1.22
NUP50-206ENST00000422489 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.41□□□□□ -1.22
NUP50-206ENST00000422489 PSORS1C1Q9UIG5 152 aa7.41□□□□□ -1.22
NUP50-206ENST00000422489 TRAPPC2LQ9UL33 140 aa7.41□□□□□ -1.22
NUP50-206ENST00000422489 PEX16Q9Y5Y5 336 aa7.41□□□□□ -1.22
NUP50-206ENST00000422489 HSPE1-MOB4S4R3N1 261 aa7.41□□□□□ -1.22
NUP50-206ENST00000422489 TRRAPQ9Y4A5 3859 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 IGHV3-43A0A0B4J1X8 118 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 MAGEA13PA6NCF6 341 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 NCBP2LA6PVI3 153 aaKnown RBP7.4□□□□□ -1.22
NUP50-206ENST00000422489 PTGES3LE9PB15 166 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 M0QZK8 103 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 AIPO00170 330 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 CCRL2O00421 344 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 CRTAPO75718 401 aaPredicted RBP7.4□□□□□ -1.22
NUP50-206ENST00000422489 GAPDHP04406 335 aaKnown RBP7.4□□□□□ -1.22
NUP50-206ENST00000422489 IGHV3-43DP0DP04 118 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 CD33P20138 364 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 REG1BP48304 166 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 RAB7AP51149 207 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 TAS2R43P59537 309 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 CD83Q01151 205 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 MPV17LQ2QL34 196 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 BEAN1Q3B7T3 259 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 NHLRC3Q5JS37 347 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 AWAT2Q6E213 333 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 LAIR2Q6ISS4 152 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 LINC00596Q86U02 117 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 THNSL2Q86YJ6 484 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 ZNF485Q8NCK3 441 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 OR4K15Q8NH41 348 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 WIPF2Q8TF74 440 aaPredicted RBP7.4□□□□□ -1.22
NUP50-206ENST00000422489 MYDGFQ969H8 173 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 SELENOIQ9C0D9 397 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 IFT22Q9H7X7 185 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 LINC00574Q9H8X3 128 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 PLCXD1Q9NUJ7 323 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 ETAA1Q9NY74 926 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 CNOT2Q9NZN8 540 aaKnown RBP7.4□□□□□ -1.22
NUP50-206ENST00000422489 ERGIC3Q9Y282 383 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 MOB4Q9Y3A3 225 aa7.4□□□□□ -1.22
NUP50-206ENST00000422489 VWFP04275 2813 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 TRBV5-7A0A0A0MS05 114 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 IGHV3-72A0A0B4J1Y9 119 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 UBE2QL1A1L167 161 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 ADARB2-AS1A8MUL3 147 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 SERPINE3A8MV23 424 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 IGKV1D-33P01593 117 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 IGKV1-33P01594 117 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 AMY1AP04745 511 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 AMY2AP04746 511 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 VHLP40337 213 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 WNT4P56705 351 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 DOC2BQ14184 412 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 SYT6Q5T7P8 510 aaPredicted RBP7.39□□□□□ -1.23
NUP50-206ENST00000422489 OGFRL1Q5TC84 451 aaPredicted RBP7.39□□□□□ -1.23
NUP50-206ENST00000422489 SAMD5Q5TGI4 173 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 RAB12Q6IQ22 244 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 C10orf99Q6UWK7 81 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 ZNF497Q6ZNH5 498 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 OR8H3Q8N146 312 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 PRR18Q8N4B5 295 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 NANOGP1Q8N7R0 232 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 OR4X2Q8NGF9 303 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 PGLYRP3Q96LB9 341 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 DERL3Q96Q80 235 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 VCXQ9H320 206 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 SPACA1Q9HBV2 294 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 LINC00527Q9UJ94 153 aa7.39□□□□□ -1.23
NUP50-206ENST00000422489 TSSC4Q9Y5U2 329 aaPredicted RBP7.39□□□□□ -1.23
NUP50-206ENST00000422489 IGHV1-3A0A0C4DH29 117 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 A0A1W2PPI3 338 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 PSMB11A5LHX3 300 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 FAM90A18PA6NE21 464 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 FAM90A16PA6NEW6 464 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 FAM90A20PA6NIJ5 464 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 FAM90A9PA6NNJ1 464 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 FAM90A12PA8MX19 464 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 FAM90A5PA8MXJ8 464 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 C15orf65H3BRN8 121 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 HSD17B6O14756 317 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 PIN1P1O15428 100 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 SPINT2O43291 252 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 ORC5O43913 435 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 PF4P02776 101 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 FAM90A15PP0C7V4 464 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 FAM90A13PP0C7W8 464 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 FAM90A14PP0C7W9 464 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 FAM90A24PP0C7X0 464 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 IGLL1P15814 213 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 MGMTP16455 207 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 IL3RAP26951 378 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 PAX5Q02548 391 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 GABPB1Q06547 395 aaPredicted RBP7.38□□□□□ -1.23
NUP50-206ENST00000422489 ACSM3Q53FZ2 586 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 TCTEX1D4Q5JR98 221 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 ZNF329Q86UD4 541 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 CDH26Q8IXH8 852 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 TMEM104Q8NE00 496 aa7.38□□□□□ -1.23
NUP50-206ENST00000422489 OR10V1Q8NGI7 309 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms