RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	SIRT7	Q9NRC8	400 aa		10.8	□□□□□ -0.68
SF1-206	ENST00000413725	KCNIP1	Q9NZI2	227 aa		10.8	□□□□□ -0.68
SF1-206	ENST00000413725	TRAV39	A0A0B4J263	110 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	KBTBD11-OT1	A0A1B0GTJ5	212 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	NAPSA	O96009	420 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	IGHV1-8	P0DP01	117 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	CDK2	P24941	298 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	GUCA2A	Q02747	115 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	SCGB2A2	Q13296	93 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	TMEM69	Q5SWH9	247 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	LCE2D	Q5TA82	110 aa	Predicted RBP	10.79	□□□□□ -0.68
SF1-206	ENST00000413725	OR52W1	Q6IF63	320 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	HEPN1	Q6WQI6	88 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.79	□□□□□ -0.68
SF1-206	ENST00000413725	IL17REL	Q6ZVW7	336 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	RTN4RL2	Q86UN3	420 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	SETD6	Q8TBK2	473 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	LHX4	Q969G2	390 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	DCUN1D5	Q9BTE7	237 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	HEXA-AS1	Q9H8Q6	139 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	UNKL	Q9H9P5	680 aa	Known RBP	10.79	□□□□□ -0.68
SF1-206	ENST00000413725	ZMAT3	Q9HA38	289 aa	Known RBP	10.79	□□□□□ -0.68
SF1-206	ENST00000413725	CALY	Q9NYX4	217 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	ADAM30	Q9UKF2	790 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	MGAT4A	Q9UM21	535 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	SESN1	Q9Y6P5	492 aa		10.79	□□□□□ -0.68
SF1-206	ENST00000413725	TRAV18	A0A075B6X5	111 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	TRBV6-6	A0A0A6YYG2	114 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	POM121C	A8CG34	1229 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	FAM25A	B3EWG3	89 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	FAM25C	B3EWG5	89 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	FAM25G	B3EWG6	89 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	RGS5	O15539	181 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	XRCC3	O43542	346 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	ORC5	O43913	435 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	HPGDS	O60760	199 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	EIF4E	P06730	217 aa	Known RBP	10.78	□□□□□ -0.68
SF1-206	ENST00000413725	SRD5A1	P18405	259 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	TALDO1	P37837	337 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	MNDA	P41218	407 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	GNG2	P59768	71 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	PITPNA	Q00169	270 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	PNLIPRP3	Q17RR3	467 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	C17orf58	Q2M2W7	97 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	CDNF	Q49AH0	187 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	PRAMEF5	Q5TYX0	476 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	OLFML2A	Q68BL7	652 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.78	□□□□□ -0.68
SF1-206	ENST00000413725	ZNF554	Q86TJ5	538 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	C11orf42	Q8N5U0	333 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	ARL11	Q969Q4	196 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	CYYR1	Q96J86	154 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	C6orf62	Q9GZU0	229 aa	Predicted RBP	10.78	□□□□□ -0.68
SF1-206	ENST00000413725	MBNL3	Q9NUK0	354 aa	Known RBP	10.78	□□□□□ -0.68
SF1-206	ENST00000413725	NUP50	Q9UKX7	468 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	KCNK7	Q9Y2U2	307 aa		10.78	□□□□□ -0.68
SF1-206	ENST00000413725	ANK3	Q12955	4377 aa	Known RBP	10.78	□□□□□ -0.68
SF1-206	ENST00000413725	TMEM235	A6NFC5	223 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	SPINT2	O43291	252 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	FSHB	P01225	129 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	CGB3	P0DN86	165 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	CGB7	P0DN87	165 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	HOXB4	P17483	251 aa	Predicted RBP	10.77	□□□□□ -0.69
SF1-206	ENST00000413725	RCC1	P18754	421 aa	Predicted RBP	10.77	□□□□□ -0.69
SF1-206	ENST00000413725	SSTR5	P35346	364 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	BPIFB3	P59826	476 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	TMEM30B	Q3MIR4	351 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	ZNF260	Q3ZCT1	412 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	HACD4	Q5VWC8	232 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	OR10A7	Q8NGE5	316 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	OR13D1	Q8NGV5	346 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	MCFD2	Q8NI22	146 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.77	□□□□□ -0.69
SF1-206	ENST00000413725	SLIRP	Q9GZT3	109 aa	Known RBP	10.77	□□□□□ -0.69
SF1-206	ENST00000413725	LINC00574	Q9H8X3	128 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	IDI2-AS1	Q9NZ38	188 aa		10.77	□□□□□ -0.69
SF1-206	ENST00000413725	MXRA5	Q9NR99	2828 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	IGHV3OR16-10	A0A075B7F0	116 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	IGHV1-69D	A0A0B4J2H0	117 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	CENPVL3	A0A0U1RRI6	287 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	C12orf77	C9JDV5	145 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	NPIPB11	E5RHQ5	1161 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	RNASEK-C17orf49	H0YIS7	233 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	C15orf65	H3BRN8	121 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	CRLF1	O75462	422 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	IGHV1-69	P01742	117 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	IGHV4-38-2	P0DP08	117 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	ELK1	P19419	428 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	OMG	P23515	440 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	COX7A1	P24310	79 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	FPR2	P25090	351 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	NFYB	P25208	207 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	DLX1	P56177	255 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	KLRD1	Q13241	179 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	HMGN3	Q15651	99 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	LTC4S	Q16873	150 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	KLF17	Q5JT82	389 aa	Predicted RBP	10.76	□□□□□ -0.69
SF1-206	ENST00000413725	ZNF880	Q6PDB4	577 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	IZUMO1	Q8IYV9	350 aa		10.76	□□□□□ -0.69
SF1-206	ENST00000413725	PNKD	Q8N490	385 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 85 ms