RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 UBE2QL1A1L167 161 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 MEIOCA2RUB1 952 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 MCRIP1C9JLW8 97 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 AIREO43918 545 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 CD34P28906 385 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
GDPD3-202ENST00000406256 MXD1Q05195 221 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 SLC9A3R2Q15599 337 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 MIDNQ504T8 468 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 PLAC9Q5JTB6 97 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 NKAPLQ5M9Q1 402 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 C5orf24Q7Z6I8 188 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 NEK7Q8TDX7 302 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 DUX5Q96PT3 197 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 NAA50Q9GZZ1 169 aaKnown RBP12.89□□□□□ -0.35
GDPD3-202ENST00000406256 ZNF286AQ9HBT8 521 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 MBNL3Q9NUK0 354 aaKnown RBP12.89□□□□□ -0.35
GDPD3-202ENST00000406256 ETAA1Q9NY74 926 aa12.89□□□□□ -0.35
GDPD3-202ENST00000406256 FAM172BPA6NC97 362 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 RAB27BO00194 218 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 HOXA3O43365 443 aaPredicted RBP12.88□□□□□ -0.35
GDPD3-202ENST00000406256 CA11O75493 328 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 NAPSAO96009 420 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 IGLV1-47P01700 117 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 BLVRBP30043 206 aaPredicted RBP12.88□□□□□ -0.35
GDPD3-202ENST00000406256 VEGFCP49767 419 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 RBM39Q14498 530 aaKnown RBP12.88□□□□□ -0.35
GDPD3-202ENST00000406256 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 FAM53AQ6NSI3 398 aaPredicted RBP12.88□□□□□ -0.35
GDPD3-202ENST00000406256 OR4P4Q8NGL7 312 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 OR13D1Q8NGV5 346 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 OR4K15Q8NH41 348 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 CCDC107Q8WV48 283 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 URM1Q9BTM9 101 aaKnown RBP12.88□□□□□ -0.35
GDPD3-202ENST00000406256 FAAP24Q9BTP7 215 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 RAB22AQ9UL26 194 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 KCNK7Q9Y2U2 307 aa12.88□□□□□ -0.35
GDPD3-202ENST00000406256 C12orf77C9JDV5 145 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 CLDN34H7C241 214 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 PAHP00439 452 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 IGHV4-59P01825 116 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 RCC1P18754 421 aaPredicted RBP12.87□□□□□ -0.35
GDPD3-202ENST00000406256 RAB6AP20340 208 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 IER3P46695 156 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 NCS1P62166 190 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 LSM3P62310 102 aaKnown RBP12.87□□□□□ -0.35
GDPD3-202ENST00000406256 BAMBIQ13145 260 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 OLFML2AQ68BL7 652 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 ZNF880Q6PDB4 577 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.87□□□□□ -0.35
GDPD3-202ENST00000406256 ZNF565Q8N9K5 539 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 RFESDQ8TAC1 157 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 UBALD1Q8TB05 177 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 PTX4Q96A99 478 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 ARHGAP5-AS1Q96IT6 56 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 IDI2-AS1Q9NZ38 188 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 DAPK2Q9UIK4 370 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 HSF4Q9ULV5 492 aa12.87□□□□□ -0.35
GDPD3-202ENST00000406256 F2RL2O00254 374 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 ORC5O43913 435 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 ARG1P05089 322 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 RNASE1P07998 156 aaKnown RBP12.86□□□□□ -0.35
GDPD3-202ENST00000406256 FBP1P09467 338 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 SNRPBP14678 240 aaKnown RBP12.86□□□□□ -0.35
GDPD3-202ENST00000406256 RPS19P39019 145 aaKnown RBP12.86□□□□□ -0.35
GDPD3-202ENST00000406256 LOXL3P58215 753 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 CTF1Q16619 201 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 BEND2Q8NDZ0 799 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 OR5H6Q8NGV6 325 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 LGALS14Q8TCE9 139 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 ZFAND2BQ8WV99 257 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 NEDD4LQ96PU5 975 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 JMJD8Q96S16 334 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 HDHD3Q9BSH5 251 aaPredicted RBP12.86□□□□□ -0.35
GDPD3-202ENST00000406256 CLEC7AQ9BXN2 247 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 PECRQ9BY49 303 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 MEGF9Q9H1U4 602 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 AK3Q9UIJ7 227 aa12.86□□□□□ -0.35
GDPD3-202ENST00000406256 H3BUI4 141 aa12.85□□□□□ -0.35
GDPD3-202ENST00000406256 GABARAPO95166 117 aa12.85□□□□□ -0.35
GDPD3-202ENST00000406256 GZMHP20718 246 aa12.85□□□□□ -0.35
GDPD3-202ENST00000406256 ANKRD13BQ86YJ7 626 aa12.85□□□□□ -0.35
GDPD3-202ENST00000406256 ABHD12Q8N2K0 398 aa12.85□□□□□ -0.35
GDPD3-202ENST00000406256 OR10A7Q8NGE5 316 aa12.85□□□□□ -0.35
GDPD3-202ENST00000406256 PIFOQ8TCI5 191 aa12.85□□□□□ -0.35
GDPD3-202ENST00000406256 FAM216AQ8WUB2 273 aa12.85□□□□□ -0.35
GDPD3-202ENST00000406256 SLC25A38Q96DW6 304 aa12.85□□□□□ -0.35
GDPD3-202ENST00000406256 TBL2Q9Y4P3 447 aaKnown RBP12.85□□□□□ -0.35
GDPD3-202ENST00000406256 TRBV6-6A0A0A6YYG2 114 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 MFNGO00587 321 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 VBP1P61758 197 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 HMGN3Q15651 99 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 OR52W1Q6IF63 320 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 RBMS3Q6XE24 437 aaKnown RBP12.84□□□□□ -0.35
GDPD3-202ENST00000406256 TMEM86BQ8N661 226 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 OR56B1Q8NGI3 324 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 OR1L1Q8NH94 360 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
GDPD3-202ENST00000406256 LEAP2Q969E1 77 aa12.84□□□□□ -0.35
GDPD3-202ENST00000406256 ARL11Q969Q4 196 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms