RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 ANKRD20A5PA0PJZ0 165 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 ODAMA1E959 279 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 TRDCB7Z8K6 153 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 DVL1O14640 695 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 SPINT2O43291 252 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 NAPSAO96009 420 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 CTXN2P0C2S0 81 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 GIFP27352 417 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 TSPAN5P62079 268 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 GNB2P62879 340 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 RGS21Q2M5E4 152 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 RSBN1Q5VWQ0 802 aaPredicted RBP11.82□□□□□ -0.52
SKA1-202ENST00000398452 STEAP1BQ6NZ63 245 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 LYPD2Q6UXB3 125 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 DNM1P46Q6ZS02 220 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 ENKURQ8TC29 256 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 MAFIPQ8WZ33 124 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 BPESC1Q9GZL8 116 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 SHARPINQ9H0F6 387 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 NCOR1P1Q9H4R4 102 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 PATZ1Q9HBE1 687 aaKnown RBP11.82□□□□□ -0.52
SKA1-202ENST00000398452 NECAP2Q9NVZ3 263 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 ANXA10Q9UJ72 324 aa11.82□□□□□ -0.52
SKA1-202ENST00000398452 FABP7O15540 132 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 LYRM1O43325 122 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 LANCL1O43813 399 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 SELLP14151 372 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 NAT1P18440 290 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 GZMHP20718 246 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 IL2RGP31785 369 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 GLIPR1P48060 266 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 SEC61A1P61619 476 aaKnown RBP11.81□□□□□ -0.52
SKA1-202ENST00000398452 HLA-DRB3P79483 266 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 PAX5Q02548 391 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 CLEC12BQ2HXU8 276 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 TUSC1Q2TAM9 212 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 CD276Q5ZPR3 534 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 OR52W1Q6IF63 320 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 ZNF782Q6ZMW2 699 aaPredicted RBP11.81□□□□□ -0.52
SKA1-202ENST00000398452 FAM185AQ8N0U4 392 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 TPRX1Q8N7U7 411 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 OR5AP2Q8NGF4 316 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 SCP2D1Q9UJQ7 156 aa11.81□□□□□ -0.52
SKA1-202ENST00000398452 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 AKAP9Q99996 3911 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 TRBV23-1A0A0A0MS06 115 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 FAM240BA0A1B0GVZ2 78 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 FAM181BA6NEQ2 426 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 HSPA12AO43301 675 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 PMP2P02689 132 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 CD3DP04234 171 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 AMY2AP04746 511 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 SLC25A16P16260 332 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 HRH1P35367 487 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 RPL31P62899 125 aaKnown RBP11.8□□□□□ -0.52
SKA1-202ENST00000398452 MEF2CQ06413 473 aaPredicted RBP11.8□□□□□ -0.52
SKA1-202ENST00000398452 ASAH1Q13510 395 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 KLF9Q13886 244 aaPredicted RBP11.8□□□□□ -0.52
SKA1-202ENST00000398452 CDK10Q15131 360 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 Q6ZS49 121 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 ZNF554Q86TJ5 538 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 GAPTQ8N292 157 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 PRR18Q8N4B5 295 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 OR4A4PQ8NGN8 299 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 MRGPRDQ8TDS7 321 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 C10orf105Q8TEF2 133 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 GALMQ96C23 342 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 COQ2Q96H96 371 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 PRRT1Q99946 306 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 GINS4Q9BRT9 223 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 GAL3ST2Q9H3Q3 398 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 TAF9BQ9HBM6 251 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 HRASLSQ9HDD0 168 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 EHFQ9NZC4 300 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 ANAPC10Q9UM13 185 aa11.8□□□□□ -0.52
SKA1-202ENST00000398452 ITPR3Q14573 2671 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 A0A1B0GW55 424 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 TNFRSF13BO14836 293 aaPredicted RBP11.79□□□□□ -0.52
SKA1-202ENST00000398452 DIRAS3O95661 229 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 WNT2P09544 360 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 DUX4L2P0CJ85 424 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 DUX4L3P0CJ86 424 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 DUX4L4P0CJ87 422 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 DUX4L5P0CJ88 424 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 DUX4L6P0CJ89 424 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 DUX4L7P0CJ90 424 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 RIPPLY3P57055 190 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 TRIM16LQ309B1 348 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 SCGB2B2Q4G0G5 96 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 DUX4L9Q6RFH8 374 aaPredicted RBP11.79□□□□□ -0.52
SKA1-202ENST00000398452 SPNS3Q6ZMD2 512 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 IL1F10Q8WWZ1 152 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 ARL11Q969Q4 196 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 MBD6Q96DN6 1003 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 SSBP3Q9BWW4 388 aaPredicted RBP11.79□□□□□ -0.52
SKA1-202ENST00000398452 DPAGT1Q9H3H5 408 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 CTSZQ9UBR2 303 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 DUX4Q9UBX2 424 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 OPN4Q9UHM6 478 aa11.79□□□□□ -0.52
SKA1-202ENST00000398452 UBE2J1Q9Y385 318 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms