RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 WDR5BQ86VZ2 330 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 TMEM251Q8N6I4 163 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 RNF126Q9BV68 326 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 TMEM59Q9BXS4 323 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 NMES1Q9C002 83 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 PCNX2A6NKB5 2137 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 SNURFLB1AK76 121 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 CRYAAP02489 173 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 CD55P08174 381 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 IAPPP10997 89 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 HLA-DOBP13765 273 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 CBLN1P23435 193 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 CSNK1A1P48729 337 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 CEBPDP49716 269 aaPredicted RBP7.39□□□□□ -1.23
NDE1-202ENST00000396355 RBM11P57052 281 aaKnown RBP7.39□□□□□ -1.23
NDE1-202ENST00000396355 FOXL2P58012 376 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 TAS2R30P59541 319 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 DECR1Q16698 335 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 LTC4SQ16873 150 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 HLA-DRB5Q30154 266 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 LINC00346Q8IVM7 164 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 ZNF485Q8NCK3 441 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 ORAOV1Q8WV07 137 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 MRGPRX1Q96LB2 322 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 MTHFD2LQ9H903 347 aaPredicted RBP7.39□□□□□ -1.23
NDE1-202ENST00000396355 SLC25A22Q9H936 323 aa7.39□□□□□ -1.23
NDE1-202ENST00000396355 NAV2Q8IVL1 2488 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 A0A0A6YYD5 115 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 DUXBA0A1W2PPF3 345 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 CDC14CA4D256 554 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 TMEM212A6NML5 194 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 ZNF737O75373 536 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 DAP3P51398 398 aaKnown RBP7.38□□□□□ -1.23
NDE1-202ENST00000396355 CEACAM21Q3KPI0 293 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 ANXA2RQ3ZCQ2 193 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 RTN4RL2Q86UN3 420 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 OR10P1Q8NGE3 313 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 TSACCQ96A04 125 aaPredicted RBP7.38□□□□□ -1.23
NDE1-202ENST00000396355 OR10A5Q9H207 317 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 TMEM100Q9NV29 134 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 KIAA2026Q5HYC2 2103 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 TMEM238LA0A1B0GVL6 79 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 ZNF728P0DKX0 622 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 TDGF1P13385 188 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 ZNF93P35789 620 aaPredicted RBP7.38□□□□□ -1.23
NDE1-202ENST00000396355 CRYBA4P53673 196 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 NANOS3P60323 173 aaKnown RBP7.38□□□□□ -1.23
NDE1-202ENST00000396355 CSNK1G2P78368 415 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 TM4SF20Q53R12 229 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 CDCP2Q5VXM1 449 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 C5orf24Q7Z6I8 188 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 SAXO1Q8IYX7 474 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 OR2I1PQ8NGU4 316 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 ZNF681Q96N22 645 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 ZNF442Q9H7R0 627 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 GP6Q9HCN6 339 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 FSCN3Q9NQT6 498 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 P4HTMQ9NXG6 502 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 SERGEFQ9UGK8 458 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 H3BUT2 72 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 ZIC2O95409 532 aaPredicted RBP7.38□□□□□ -1.23
NDE1-202ENST00000396355 SEC11BP0C7V7 166 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 DRD3P35462 400 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 CAPZBP47756 277 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.38□□□□□ -1.23
NDE1-202ENST00000396355 METRNLQ641Q3 311 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 SLC18B1Q6NT16 456 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 GLIPR1L1Q6UWM5 242 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 GNPNAT1Q96EK6 184 aaPredicted RBP7.38□□□□□ -1.23
NDE1-202ENST00000396355 CNRIP1Q96F85 164 aaPredicted RBP7.38□□□□□ -1.23
NDE1-202ENST00000396355 PGLYRP3Q96LB9 341 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 EGLN1Q9GZT9 426 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 MBNL1Q9NR56 388 aaKnown RBP7.38□□□□□ -1.23
NDE1-202ENST00000396355 HILPDAQ9Y5L2 63 aa7.38□□□□□ -1.23
NDE1-202ENST00000396355 ZNF462Q96JM2 2506 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 LOC102723971A0A1B0GUV8 181 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 DPRXA6NFQ7 191 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 M0R2Z0 102 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 POU2F2P09086 479 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 DANCRP0C864 163 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 PF4V1P10720 104 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 EFNA3P52797 238 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 MPV17L2Q567V2 206 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 LCN12Q6JVE5 192 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 MRPL54Q6P161 138 aaKnown RBP7.37□□□□□ -1.23
NDE1-202ENST00000396355 SHISA5Q8N114 240 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 SMIM20Q8N5G0 67 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 ACOT4Q8N9L9 421 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 ZNF443Q9Y2A4 671 aaPredicted RBP7.37□□□□□ -1.23
NDE1-202ENST00000396355 SLC17A2O00624 439 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 SERF1AO75920 110 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 IL6RP08887 468 aaPredicted RBP7.37□□□□□ -1.23
NDE1-202ENST00000396355 AZU1P20160 251 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 DUSP1P28562 367 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 SRP14P37108 136 aaKnown RBP7.37□□□□□ -1.23
NDE1-202ENST00000396355 ANKRD55Q3KP44 614 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 SPANXN5Q5MJ07 72 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 WDFY1Q8IWB7 410 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 ZDHHC22Q8N966 263 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 OR2A1Q8NGT9 310 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms