RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 PNKDQ8N490 385 aa15.68■□□□□ 0.1
HOXA9-202ENST00000396345 OR13D1Q8NGV5 346 aa15.68■□□□□ 0.1
HOXA9-202ENST00000396345 OR4K15Q8NH41 348 aa15.68■□□□□ 0.1
HOXA9-202ENST00000396345 NDNFQ8TB73 568 aa15.68■□□□□ 0.1
HOXA9-202ENST00000396345 RAB2BQ8WUD1 216 aa15.68■□□□□ 0.1
HOXA9-202ENST00000396345 RAB3CQ96E17 227 aa15.68■□□□□ 0.1
HOXA9-202ENST00000396345 SLC6A7Q99884 636 aa15.68■□□□□ 0.1
HOXA9-202ENST00000396345 DCSTAMPQ9H295 470 aa15.68■□□□□ 0.1
HOXA9-202ENST00000396345 SOX21Q9Y651 276 aaPredicted RBP15.68■□□□□ 0.1
HOXA9-202ENST00000396345 RAB27BO00194 218 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 OMGP23515 440 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 C6orf183Q5T699 404 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 OR52W1Q6IF63 320 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 MRPL30Q8TCC3 161 aaKnown RBP15.67■□□□□ 0.1
HOXA9-202ENST00000396345 BCL7BQ9BQE9 202 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 SUCNR1Q9BXA5 334 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 TMEM133Q9H2Q1 129 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 LINC00574Q9H8X3 128 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 RHBDL2Q9NX52 303 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 IDI2-AS1Q9NZ38 188 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 AK3Q9UIJ7 227 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 SPATA2Q9UM82 520 aa15.67■□□□□ 0.1
HOXA9-202ENST00000396345 NPFFO15130 113 aa15.66■□□□□ 0.1
HOXA9-202ENST00000396345 ORC5O43913 435 aa15.66■□□□□ 0.1
HOXA9-202ENST00000396345 NOL3O60936 208 aaKnown RBP15.66■□□□□ 0.1
HOXA9-202ENST00000396345 SSTR5P35346 364 aa15.66■□□□□ 0.1
HOXA9-202ENST00000396345 GDNFP39905 211 aa15.66■□□□□ 0.1
HOXA9-202ENST00000396345 RORCP51449 518 aa15.66■□□□□ 0.1
HOXA9-202ENST00000396345 PIP4P2Q8N4L2 257 aa15.66■□□□□ 0.1
HOXA9-202ENST00000396345 RFESDQ8TAC1 157 aa15.66■□□□□ 0.1
HOXA9-202ENST00000396345 ARL11Q969Q4 196 aa15.66■□□□□ 0.1
HOXA9-202ENST00000396345 KCTD12Q96CX2 325 aaKnown RBP15.66■□□□□ 0.1
HOXA9-202ENST00000396345 RIMS4Q9H426 269 aaPredicted RBP15.66■□□□□ 0.1
HOXA9-202ENST00000396345 CHMP1AQ9HD42 196 aaPredicted RBP15.66■□□□□ 0.1
HOXA9-202ENST00000396345 A0A075B6Q4 140 aa15.65■□□□□ 0.1
HOXA9-202ENST00000396345 NPIPB11E5RHQ5 1161 aa15.65■□□□□ 0.1
HOXA9-202ENST00000396345 SCGNO76038 276 aa15.65■□□□□ 0.1
HOXA9-202ENST00000396345 RCC1P18754 421 aaPredicted RBP15.65■□□□□ 0.1
HOXA9-202ENST00000396345 TRAT1Q6PIZ9 186 aa15.65■□□□□ 0.1
HOXA9-202ENST00000396345 BAIAP2L2Q6UXY1 529 aa15.65■□□□□ 0.1
HOXA9-202ENST00000396345 SIGLECL1Q8N7X8 197 aa15.65■□□□□ 0.1
HOXA9-202ENST00000396345 ZNF418Q8TF45 676 aaPredicted RBP15.65■□□□□ 0.1
HOXA9-202ENST00000396345 SLC25A38Q96DW6 304 aa15.65■□□□□ 0.1
HOXA9-202ENST00000396345 KIRREL1Q96J84 757 aa15.65■□□□□ 0.1
HOXA9-202ENST00000396345 KCNIP1Q9NZI2 227 aa15.65■□□□□ 0.1
HOXA9-202ENST00000396345 IGHV2-26A0A0B4J1V2 119 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 A0A0U1RQK1 487 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 MEIOCA2RUB1 952 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 C12orf77C9JDV5 145 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 C15orf65H3BRN8 121 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 NAPSAO96009 420 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 HIST1H1DP16402 221 aaKnown RBP15.64■□□□□ 0.09
HOXA9-202ENST00000396345 GNB3P16520 340 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 NFYBP25208 207 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 SAA4P35542 130 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 SPCS2Q15005 226 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 LTC4SQ16873 150 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 TUSC1Q2TAM9 212 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 DEFB112Q30KQ8 113 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 MIDNQ504T8 468 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 OLFML2AQ68BL7 652 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 PRIMA1Q86XR5 153 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 OR11H6Q8NGC7 330 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 OR10A7Q8NGE5 316 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 UBALD1Q8TB05 177 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 ZNF48Q96MX3 618 aaPredicted RBP15.64■□□□□ 0.09
HOXA9-202ENST00000396345 CMSS1Q9BQ75 279 aaKnown RBP15.64■□□□□ 0.09
HOXA9-202ENST00000396345 HDHD3Q9BSH5 251 aaPredicted RBP15.64■□□□□ 0.09
HOXA9-202ENST00000396345 CLEC7AQ9BXN2 247 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 RAB9BQ9NP90 201 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 MBNL3Q9NUK0 354 aaKnown RBP15.64■□□□□ 0.09
HOXA9-202ENST00000396345 KCNK7Q9Y2U2 307 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 FAM96BQ9Y3D0 163 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 CEPT1Q9Y6K0 416 aa15.64■□□□□ 0.09
HOXA9-202ENST00000396345 FAM172BPA6NC97 362 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 MFNGO00587 321 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 SPINT2O43291 252 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 ARG1P05089 322 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 CD3GP09693 182 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 LGALS4P56470 323 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 MRPS15P82914 257 aaKnown RBP15.63■□□□□ 0.09
HOXA9-202ENST00000396345 DYNC1I2Q13409 638 aaKnown RBP15.63■□□□□ 0.09
HOXA9-202ENST00000396345 ARL6IP1Q15041 203 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 CDNFQ49AH0 187 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 RBMS3Q6XE24 437 aaKnown RBP15.63■□□□□ 0.09
HOXA9-202ENST00000396345 ABHD12Q8N2K0 398 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 SETD6Q8TBK2 473 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 PHF21AQ96BD5 680 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 ISOC1Q96CN7 298 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 ZMAT3Q9HA38 289 aaKnown RBP15.63■□□□□ 0.09
HOXA9-202ENST00000396345 TAF9BQ9HBM6 251 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 C12orf4Q9NQ89 552 aa15.63■□□□□ 0.09
HOXA9-202ENST00000396345 DNHD1Q96M86 4753 aa15.62■□□□□ 0.09
HOXA9-202ENST00000396345 TRBV6-6A0A0A6YYG2 114 aa15.62■□□□□ 0.09
HOXA9-202ENST00000396345 MDFIC2A0A1B0GVS7 189 aa15.62■□□□□ 0.09
HOXA9-202ENST00000396345 ODF3BA8MYP8 253 aa15.62■□□□□ 0.09
HOXA9-202ENST00000396345 TCF21O43680 179 aa15.62■□□□□ 0.09
HOXA9-202ENST00000396345 HBZP02008 142 aa15.62■□□□□ 0.09
HOXA9-202ENST00000396345 ZNF182P17025 639 aaPredicted RBP15.62■□□□□ 0.09
HOXA9-202ENST00000396345 CD34P28906 385 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms