RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 HNF1AP20823 631 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 DTYMKP23919 212 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 RPL12P30050 165 aaKnown RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 TFPI2P48307 235 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 NPY4RP50391 375 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 SLC10A1Q14973 349 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 ANKRD55Q3KP44 614 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 GXYLT1Q4G148 440 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 AARDQ4LEZ3 155 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 SLC22A6Q4U2R8 563 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 GGNBP1Q5YKI7 109 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 SP5Q6BEB4 398 aaPredicted RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 SHISA6Q6ZSJ9 500 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 LHFPL1Q86WI0 220 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 TMEM104Q8NE00 496 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 OR51T1Q8NGJ9 327 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 OR2AJ1Q8NGZ0 328 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 BCL2L2Q92843 193 aaPredicted RBP4.61□□□□□ -1.67
VPS41-203ENST00000395969 SMIM3Q9BZL3 60 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 DLL3Q9NYJ7 618 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 OR14J1Q9UGF5 321 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 RNF24Q9Y225 148 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 UNC80Q8N2C7 3258 aa4.61□□□□□ -1.67
VPS41-203ENST00000395969 TRIOBPQ9H2D6 2365 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 DOCK10Q96BY6 2186 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 TGIF2-C20orf24A0A0A6YYL0 155 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 SMCO3A2RU48 225 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 NPIPA3F8WFD2 350 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 DLEU1O43261 78 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 TGOLN2O43493 480 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 DEDDO75618 318 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 RPS2P15880 293 aaKnown RBP4.6□□□□□ -1.67
VPS41-203ENST00000395969 GABRR1P24046 479 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 TDGF1P3P51864 188 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 FMODQ06828 376 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 ZNF616Q08AN1 781 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 OR2T2Q6IF00 324 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 ZNF880Q6PDB4 577 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 KLHL24Q6TFL4 600 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 FBXW12Q6X9E4 464 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 ZNF705AQ6ZN79 300 aaPredicted RBP4.6□□□□□ -1.67
VPS41-203ENST00000395969 LFNGQ8NES3 379 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 OR56B2PQ8NGI1 322 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 TERB2Q8NHR7 220 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 TSEN15Q8WW01 171 aaKnown RBP4.6□□□□□ -1.67
VPS41-203ENST00000395969 FRZBQ92765 325 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 RAB39BQ96DA2 213 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 ZNF385AQ96PM9 386 aaKnown RBP4.6□□□□□ -1.67
VPS41-203ENST00000395969 RTBDNQ9BSG5 229 aaPredicted RBP4.6□□□□□ -1.67
VPS41-203ENST00000395969 TMEM208Q9BTX3 173 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 OR51B6Q9H340 312 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 MED29Q9NX70 200 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 PRR13Q9NZ81 148 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 JKAMPQ9P055 326 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 STRAPQ9Y3F4 350 aaKnown RBP4.6□□□□□ -1.67
VPS41-203ENST00000395969 TRAV17A0A0B4J275 112 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 IGKV1-9A0A0C4DH69 117 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 SERPINE3A8MV23 424 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 H3BQ15 152 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 HSD17B6O14756 317 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 TNFSF11O14788 317 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 LILRA1O75019 489 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 FCGR2CP31995 323 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 GLIPR1P48060 266 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 CLDN17P56750 224 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 TMEM33P57088 247 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 UNC119Q13432 240 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 CLEC12BQ2HXU8 276 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 TMEM177Q53S58 311 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 SOHLH1Q5JUK2 328 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 OR51A2Q8NGJ7 313 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 KCNG3Q8TAE7 436 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 PKIBQ9C010 78 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 OR10A2Q9H208 303 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 PITPNC1Q9UKF7 332 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 VDAC3Q9Y277 283 aa4.6□□□□□ -1.67
VPS41-203ENST00000395969 C11orf98E9PRG8 122 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 K7EPK0 472 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 IFNL4K9M1U5 179 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 CYB5BO43169 146 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 METTL15P1P0C7V9 234 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 FPR2P25090 351 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 TIMP3P35625 211 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 CFHR2P36980 270 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 CAMLGP49069 296 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 UCP3P55916 312 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 MRPS11P82912 194 aaKnown RBP4.59□□□□□ -1.67
VPS41-203ENST00000395969 DAZAP2Q15038 168 aaPredicted RBP4.59□□□□□ -1.67
VPS41-203ENST00000395969 MRPL52Q86TS9 123 aaKnown RBP4.59□□□□□ -1.67
VPS41-203ENST00000395969 TMEM183AQ8IXX5 376 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 FAM71E2Q8N5Q1 922 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 SUMF2Q8NBJ7 301 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 ADAT3Q96EY9 351 aaPredicted RBP4.59□□□□□ -1.67
VPS41-203ENST00000395969 PLPPR2Q96GM1 343 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 POM121L2Q96KW2 1035 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 SNX22Q96L94 193 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 FOXB1Q99853 325 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 TAS2R4Q9NYW5 299 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 IKZF2Q9UKS7 526 aa4.59□□□□□ -1.67
VPS41-203ENST00000395969 MCTS1Q9ULC4 181 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms