RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 ELF5Q9UKW6 265 aaPredicted RBP9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 UBE2J1Q9Y385 318 aaPredicted RBP9.59□□□□□ -0.87
DEPDC4-202ENST00000378244 MDFIC2A0A1B0GVS7 189 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 C17orf98A8MV24 154 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 CLPXO76031 633 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 FSHBP01225 129 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 DYNC1I2Q13409 638 aaKnown RBP9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 MADCAM1Q13477 382 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 C1orf122Q6ZSJ8 110 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 IZUMO1Q8IYV9 350 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 SAMD12Q8N8I0 201 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 OR10R2Q8NGX6 335 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 RAB2BQ8WUD1 216 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 LEAP2Q969E1 77 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 ARL11Q969Q4 196 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 DMRTB1Q96MA1 342 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 SLC6A7Q99884 636 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 PECRQ9BY49 303 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 CALYQ9NYX4 217 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 AK3Q9UIJ7 227 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 KCNK7Q9Y2U2 307 aa9.58□□□□□ -0.88
DEPDC4-202ENST00000378244 IGHV1-69DA0A0B4J2H0 117 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 KBTBD11-OT1A0A1B0GTJ5 212 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 MEIOCA2RUB1 952 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 H3BUI4 141 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 NOL3O60936 208 aaKnown RBP9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 IGHV1-69P01742 117 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 RAB6AP20340 208 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 RANBP1P43487 201 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 RORCP51449 518 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 TMBIM6P55061 237 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 C17orf58Q2M2W7 97 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 FAM53AQ6NSI3 398 aaPredicted RBP9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 PHF21AQ96BD5 680 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 ISOC1Q96CN7 298 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 SLC25A38Q96DW6 304 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 DUX5Q96PT3 197 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 SUCNR1Q9BXA5 334 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 DSCAML1Q8TD84 2053 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 FOXI3A8MTJ6 420 aaPredicted RBP9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 H3BMQ9 156 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 CROCCP3Q8IVE0 287 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 TEX29Q8N6K0 151 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 MRPL30Q8TCC3 161 aaKnown RBP9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 CORO2AQ92828 525 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 HEXA-AS1Q9H8Q6 139 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 CEPT1Q9Y6K0 416 aa9.57□□□□□ -0.88
DEPDC4-202ENST00000378244 IGHV3-43A0A0B4J1X8 118 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 A0A0U1RQK1 487 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 ZNF729A6NN14 1252 aaPredicted RBP9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 IGHV3-43DP0DP04 118 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 GZMHP20718 246 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 FPR2P25090 351 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 SAA4P35542 130 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 HCP5Q6MZN7 132 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 HEPN1Q6WQI6 88 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 C17orf50Q8WW18 174 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 PTX4Q96A99 478 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 KIRREL1Q96J84 757 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 CMSS1Q9BQ75 279 aaKnown RBP9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 TAF9BQ9HBM6 251 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 TNFRSF19Q9NS68 423 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 TAS2R3Q9NYW6 316 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 ABRACLQ9P1F3 81 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 ZNRD1Q9P1U0 126 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 SPATA2Q9UM82 520 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 VGLL3A8MV65 326 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 C12orf77C9JDV5 145 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 GLAP06280 429 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 CGB3P0DN86 165 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 CGB7P0DN87 165 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 PTHLHP12272 177 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 HIST1H1DP16402 221 aaKnown RBP9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 MRPS15P82914 257 aaKnown RBP9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 PAX5Q02548 391 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 ARFRP1Q13795 201 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 CDNFQ49AH0 187 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 NCR3LG1Q68D85 454 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 Q6ZPA2 131 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 IL1F10Q8WWZ1 152 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 MAFIPQ8WZ33 124 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 TMEM133Q9H2Q1 129 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 UNKLQ9H9P5 680 aaKnown RBP9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 ZNF230Q9UIE0 474 aaPredicted RBP9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 HSF4Q9ULV5 492 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 ETV7Q9Y603 341 aa9.56□□□□□ -0.88
DEPDC4-202ENST00000378244 TRAV18A0A075B6X5 111 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 A0A1W2PPE3 182 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 TMEM235A6NFC5 223 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 NPFFO15130 113 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 CA11O75493 328 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 ARG1P05089 322 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 FCER2P06734 321 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 GNG10P50151 68 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 UBE2E1P51965 193 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 GUCA2AQ02747 115 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 FAM189A2Q15884 450 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 DEFB112Q30KQ8 113 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 LHFPL4Q7Z7J7 247 aa9.55□□□□□ -0.88
DEPDC4-202ENST00000378244 ABHD12Q8N2K0 398 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms