RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 OR2W1Q9Y3N9 320 aa15.89■□□□□ 0.13
USP49-202ENST00000373010 F8W036 122 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 SLC33A1O00400 549 aaPredicted RBP15.88■□□□□ 0.13
USP49-202ENST00000373010 MUC1P15941 1255 aaPredicted RBP15.88■□□□□ 0.13
USP49-202ENST00000373010 UCP1P25874 307 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 BLOC1S1P78537 153 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 GNMTQ14749 295 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 CXorf66Q5JRM2 361 aaPredicted RBP15.88■□□□□ 0.13
USP49-202ENST00000373010 BTNL8Q6UX41 500 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 CMTM1Q8IZ96 169 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 PUSL1Q8N0Z8 303 aaKnown RBP15.88■□□□□ 0.13
USP49-202ENST00000373010 PRR18Q8N4B5 295 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 FAM24AA6NFZ4 105 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 NKX2-1P43699 371 aaPredicted RBP15.88■□□□□ 0.13
USP49-202ENST00000373010 WDR31Q8NA23 367 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 KLF14Q8TD94 323 aaPredicted RBP15.88■□□□□ 0.13
USP49-202ENST00000373010 NRIP2Q9BQI9 281 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 C11orf1Q9H5F2 150 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 TINAGQ9UJW2 476 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 POLDIP2Q9Y2S7 368 aa15.88■□□□□ 0.13
USP49-202ENST00000373010 DSPP15924 2871 aaKnown RBP15.87■□□□□ 0.13
USP49-202ENST00000373010 BORCS7-ASMTA0A0B4J1R7 106 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 IQCF6A8MYZ5 107 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 NXPH2O95156 264 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 NXPH3O95157 252 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 F12P00748 615 aaPredicted RBP15.87■□□□□ 0.13
USP49-202ENST00000373010 CAV2P51636 162 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 ZNF169Q14929 603 aaPredicted RBP15.87■□□□□ 0.13
USP49-202ENST00000373010 OR8G1Q15617 311 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 BOD1Q96IK1 185 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 CABLES2Q9BTV7 478 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 TLNRD1Q9H1K6 362 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 UQCC1Q9NVA1 299 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 GTF3C1Q12789 2109 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 SSSCA1O60232 199 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 PGA5P0DJD9 388 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 HOXA4Q00056 320 aaPredicted RBP15.87■□□□□ 0.13
USP49-202ENST00000373010 EWSR1Q01844 656 aaKnown RBP eCLIP15.87■□□□□ 0.13
USP49-202ENST00000373010 SH3BGRL3Q9H299 93 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 PARP11Q9NR21 331 aa15.87■□□□□ 0.13
USP49-202ENST00000373010 SVILO95425 2214 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 CBR1P16152 277 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 CEBPDP49716 269 aaPredicted RBP15.86■□□□□ 0.13
USP49-202ENST00000373010 NMSQ5H8A3 153 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 ZNF497Q6ZNH5 498 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 CXorf67Q86X51 503 aaPredicted RBP15.86■□□□□ 0.13
USP49-202ENST00000373010 Q8IYB0 196 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 OR2C3Q8N628 320 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 OR51H1Q8NH63 302 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 SARAFQ96BY9 339 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 SPIN2AQ99865 258 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 SPIN2BQ9BPZ2 258 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 SPENQ96T58 3664 aaKnown RBP15.86■□□□□ 0.13
USP49-202ENST00000373010 IGSF23A1L1A6 192 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 H0Y980 276 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 OR8U9P0C7N5 309 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 SWI5Q1ZZU3 235 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 SMUG1Q53HV7 270 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 HSD17B11Q8NBQ5 300 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 OR8U1Q8NH10 309 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 TAAR6Q96RI8 345 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 GINS3Q9BRX5 216 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 OBP2BQ9NPH6 170 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 TRAPPC2LQ9UL33 140 aa15.86■□□□□ 0.13
USP49-202ENST00000373010 COX5AP20674 150 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 F2RP25116 425 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 HOXC12P31275 282 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 C10orf91Q5T1B1 145 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 SVBPQ8N300 66 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 OR5D13Q8NGL4 314 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 FAM212BQ9NTI7 297 aaPredicted RBP15.85■□□□□ 0.13
USP49-202ENST00000373010 OR14J1Q9UGF5 321 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 FZR1Q9UM11 496 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 INTS1Q8N201 2190 aaKnown RBP15.85■□□□□ 0.13
USP49-202ENST00000373010 KIAA2026Q5HYC2 2103 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 PRR33A8MZF0 331 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 MLNRO43193 412 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 IGKV3-15P01624 115 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 VDAC1P21796 283 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 MDH2P40926 338 aaKnown RBP15.85■□□□□ 0.13
USP49-202ENST00000373010 ACSF3Q4G176 576 aaPredicted RBP15.85■□□□□ 0.13
USP49-202ENST00000373010 ZNF826PQ6ZT77 177 aa15.85■□□□□ 0.13
USP49-202ENST00000373010 CARHSP1Q9Y2V2 147 aaKnown RBP15.85■□□□□ 0.13
USP49-202ENST00000373010 A0A0G2JRQ6 117 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 RNASEK-C17orf49H0YIS7 233 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 WDR1O75083 606 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 SPP1P10451 314 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 OMGP23515 440 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 FHITP49789 147 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 F2RL1P55085 397 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 CLINT1Q14677 625 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 OR10V1Q8NGI7 309 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 TRIM77I1YAP6 450 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 SH2D1BO14796 132 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 WNT9BO14905 357 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 C1QL1O75973 258 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 SEC11BP0C7V7 166 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 PSG2P11465 335 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 ZNF146Q15072 292 aa15.84■□□□□ 0.13
USP49-202ENST00000373010 TESK1Q15569 626 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms