RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 PRRG4Q9BZD6 226 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 ZNF552Q9H707 407 aaPredicted RBP11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 DEPPQ9NTK1 212 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 GAR1Q9NY12 217 aaKnown RBP11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 PPP1R3CQ9UQK1 317 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 DEFA4P12838 97 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 PRDX4Q13162 271 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 SPATA46Q5T0L3 261 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 OR2T2Q6IF00 324 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 FAM53AQ6NSI3 398 aaPredicted RBP11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 LFNGQ8NES3 379 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 CLDND2Q8NHS1 167 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 FRZBQ92765 325 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 C10orf35Q96D05 121 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 SNX22Q96L94 193 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 PHF7Q9BWX1 381 aaPredicted RBP11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 GPR35Q9HC97 309 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 RPRMQ9NS64 109 aa11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 ERRFI1Q9UJM3 462 aaPredicted RBP11.52□□□□□ -0.57
PPARGC1B-202ENST00000360453 MED12LQ86YW9 2145 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 USF3Q68DE3 2245 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 CBR3O75828 277 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 CD55P08174 381 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 CELA3AP09093 270 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 CST2P09228 141 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 B3GALT5-AS1P59052 145 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 RAB1AP62820 205 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 ARL16Q0P5N6 197 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 SGCZQ96LD1 299 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 OR1A1Q9P1Q5 309 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 KIAA1456Q9P272 454 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 RPL36A-HNRNPH2H7BZ11 118 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 CDS2O95674 445 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 SELEP16581 610 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 BMP5P22003 454 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 TUBG1P23258 451 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 GDF1P27539 372 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 CDX1P47902 265 aaPredicted RBP11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 STARD6P59095 220 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 C3AR1Q16581 482 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 NMSQ5H8A3 153 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 TMEM211Q6ICI0 200 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 SPINK14Q6IE38 97 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 CCDC54Q8NEL0 328 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 IFI44Q8TCB0 444 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 ABHD5Q8WTS1 349 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 TVP23CQ96ET8 276 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 Q9N2K0 584 aa11.51□□□□□ -0.57
PPARGC1B-202ENST00000360453 TRGC1P0CF51 173 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 PGA5P0DJD9 388 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 GAMTQ14353 236 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 KHDC3LQ587J8 217 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 GPR146Q96CH1 333 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 SLC25A31Q9H0C2 315 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 SMOC1Q9H4F8 434 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 RBM7Q9Y580 266 aaKnown RBP11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 PGLYRP1O75594 196 aaPredicted RBP11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 P04436 131 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 CD200P41217 278 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 ARF1P84077 181 aaKnown RBP11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 ASCL4Q6XD76 172 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 Q6ZSR3 168 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 ZNF295-AS1Q8N0V1 137 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 OR5T1Q8NG75 326 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 HES7Q9BYE0 225 aa11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 SPENQ96T58 3664 aaKnown RBP11.5□□□□□ -0.57
PPARGC1B-202ENST00000360453 A0A087WZY1 265 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 VDAC1P21796 283 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 PMELP40967 661 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 UCP3P55916 312 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 MALSU1Q96EH3 234 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 TMEM56Q96MV1 263 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 CACNG5Q9UF02 275 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 TMEM56-RWDD3S4R434 201 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 RHBDL1O75783 438 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 SERPINE2P07093 398 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 NKX6-1P78426 367 aaPredicted RBP11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 ID3Q02535 119 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 Q0VFX4 171 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 AGBL5Q8NDL9 886 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 CPT1CQ8TCG5 803 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 SAP25Q8TEE9 199 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 PLK3Q9H4B4 646 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 PLA2G3Q9NZ20 509 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 MAP1BP46821 2468 aaKnown RBP11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 CEBPZOSA8MTT3 80 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 SLC34A2O95436 690 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 CXCL12P48061 93 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 ZNF726P1Q15940 193 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 EXT1Q16394 746 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 WDR5BQ86VZ2 330 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 INTS12Q96CB8 462 aaKnown RBP11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 LRFN1Q9P244 771 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 KCNS2Q9ULS6 477 aa11.49□□□□□ -0.57
PPARGC1B-202ENST00000360453 SVILO95425 2214 aa11.48□□□□□ -0.57
PPARGC1B-202ENST00000360453 PPP1R2P9O14990 202 aa11.48□□□□□ -0.57
PPARGC1B-202ENST00000360453 TOX3O15405 576 aaPredicted RBP11.48□□□□□ -0.57
PPARGC1B-202ENST00000360453 RNF224P0DH78 156 aa11.48□□□□□ -0.57
PPARGC1B-202ENST00000360453 HLA-DRB3P79483 266 aa11.48□□□□□ -0.57
PPARGC1B-202ENST00000360453 TESK1Q15569 626 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms