RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 RDH11Q8TC12 318 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 GPR151Q8TDV0 419 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 THEM6Q8WUY1 208 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 NEUROG1Q92886 237 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 TMEM159Q96B96 161 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 PGLYRP3Q96LB9 341 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 NUF2Q9BZD4 464 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 CIPCQ9C0C6 399 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 SLC22A4Q9H015 551 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 PPDPFQ9H3Y8 114 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 UQCC1Q9NVA1 299 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 MARCH5Q9NX47 278 aa1.34□□□□□ -2.2
SMARCAD1-202ENST00000359052 IGHV3-16A0A0C4DH30 117 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 I3L4J1 428 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 K7EQD1 137 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 HLA-AP01891 365 aaKnown RBP1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 C1QCP02747 245 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 IL5P05113 134 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 FCGR1AP12314 374 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 TNNI3P19429 210 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 BCL3P20749 454 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 CA6P23280 308 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 CDKN2BP42772 138 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 REG1BP48304 166 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SELENOPP49908 381 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 ACLYP53396 1101 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SUMO2P61956 95 aaKnown RBP1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 BLOC1S1P78537 153 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 PTGES3Q15185 160 aaKnown RBP1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 MBOAT2Q6ZWT7 520 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 FAM57BQ71RH2 274 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 PAGE2Q7Z2X7 111 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 CROCCP2Q86T23 111 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 HS3ST5Q8IZT8 346 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR8G5Q8NG78 346 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR7A2PQ8NGA2 310 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR51D1Q8NGF3 324 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR5K1Q8NHB7 308 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SLC38A5Q8WUX1 472 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SPACA5Q96QH8 159 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 FNDC11Q9BVV2 318 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 MFFQ9GZY8 342 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 PIGUQ9H490 435 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 IL36RNQ9UBH0 155 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 OPN4Q9UHM6 478 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 HS3ST2Q9Y278 367 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 ARHGEF17Q96PE2 2063 aaPredicted RBP1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 IGKV6-21A0A0C4DH24 114 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 A0A0U1RQV1 116 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 PINLYPA6NC86 204 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 PGRMC1O00264 195 aaKnown RBP1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 STX7O15400 261 aaKnown RBP1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 PLIN3O60664 434 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 STX11O75558 287 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 LRATO95237 230 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 GFAPP14136 432 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF7P17097 686 aaPredicted RBP1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 P2RX1P51575 399 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 OR12D2P58182 307 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SKP1P63208 163 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 IL5RAQ01344 420 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 C16orf72Q14CZ0 275 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 TOMM34Q15785 309 aaPredicted RBP1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 TBC1D28Q2M2D7 210 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 Q6ZR54 194 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 CCDC121Q6ZUS5 278 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 FAM231DQ6ZW35 169 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 DCUN1D3Q8IWE4 304 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 UMODL1-AS1Q8N2C9 162 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF283Q8N7M2 679 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 POM121L12Q8N7R1 296 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 POP5Q969H6 163 aaKnown RBP1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 MYLPFQ96A32 169 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 QKIQ96PU8 341 aaKnown RBP eCLIP1.33□□□□□ -2.28e-8■■■■□ 24.4
SMARCAD1-202ENST00000359052 PLIN2Q99541 437 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 MGLLQ99685 303 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SPIN2AQ99865 258 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SPIN2BQ9BPZ2 258 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SULT4A1Q9BR01 284 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 MS4A8Q9BY19 250 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 MDFICQ9P1T7 246 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 RPS6KB2Q9UBS0 482 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 CLEC4EQ9ULY5 219 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 RPH3ALQ9UNE2 315 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SIGLEC9Q9Y336 463 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 KPTNQ9Y664 436 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 LRP1BQ9NZR2 4599 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 TECTAO75443 2155 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 IGKV1-27A0A075B6S5 117 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 WDR91A4D1P6 747 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 KCNK1O00180 336 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SULT1C2O00338 296 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 ZNF207O43670 478 aaKnown RBP1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 HIST1H2BKO60814 126 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 AP2A2O94973 939 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 SOD1P00441 154 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 HIST1H2BJP06899 126 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 PGA4P0DJD7 388 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 PGA3P0DJD8 388 aa1.33□□□□□ -2.2
SMARCAD1-202ENST00000359052 NELFEP18615 380 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms