RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ZNF497Q6ZNH5 498 aa13.56□□□□□ -0.24
BRCC3-202ENST00000340647 C16orf82Q7Z2V1 217 aa13.56□□□□□ -0.24
BRCC3-202ENST00000340647 C5orf24Q7Z6I8 188 aa13.56□□□□□ -0.24
BRCC3-202ENST00000340647 GAPTQ8N292 157 aa13.56□□□□□ -0.24
BRCC3-202ENST00000340647 CHCHD3Q9NX63 227 aaKnown RBP13.56□□□□□ -0.24
BRCC3-202ENST00000340647 OOSP1A8MZH6 123 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 CSTBP04080 98 aaKnown RBP13.55□□□□□ -0.24
BRCC3-202ENST00000340647 MAS1P04201 325 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 CDK1P06493 297 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 BRS3P32247 399 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 VDAC2P45880 294 aaPredicted RBP13.55□□□□□ -0.24
BRCC3-202ENST00000340647 GNG10P50151 68 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 KPRPQ5T749 579 aaPredicted RBP13.55□□□□□ -0.24
BRCC3-202ENST00000340647 RNLSQ5VYX0 342 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 LINC00596Q86U02 117 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 DRAM1Q8N682 238 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 OR10A7Q8NGE5 316 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 CCDC107Q8WV48 283 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 BANF2Q9H503 90 aa13.55□□□□□ -0.24
BRCC3-202ENST00000340647 MRPS28Q9Y2Q9 187 aaKnown RBP13.55□□□□□ -0.24
BRCC3-202ENST00000340647 SC5DO75845 299 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 LPLP06858 475 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 SNRNP70P08621 437 aaKnown RBP13.54□□□□□ -0.24
BRCC3-202ENST00000340647 CD37P11049 281 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 GTF2F2P13984 249 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 CEACAM3P40198 252 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 TAS2R43P59537 309 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 IRF3Q14653 427 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 C6orf141Q5SZD1 244 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 ATAD3CQ5T2N8 411 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 LRRTM1Q86UE6 522 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 NDUFA11Q86Y39 141 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 THNSL2Q86YJ6 484 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 CDH26Q8IXH8 852 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 STX19Q8N4C7 294 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 DTX3Q8N9I9 347 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 OR5AU1Q8NGC0 362 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 OR56B4Q8NH76 319 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 ST6GALNAC6Q969X2 333 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 CREB3L1Q96BA8 519 aa13.54□□□□□ -0.24
BRCC3-202ENST00000340647 TMEM30CPA0ZSE6 113 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 SLC31A2O15432 143 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 ZNF780AO75290 641 aaPredicted RBP13.53□□□□□ -0.24
BRCC3-202ENST00000340647 ZNF134P52741 427 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 AQP4P55087 323 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 MED21Q13503 144 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 SLC16A12Q6ZSM3 486 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 JAGN1Q8N5M9 183 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 ZNF439Q8NDP4 499 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 CAPSLQ8WWF8 208 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 TOMM40LQ969M1 308 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 Q96M66 194 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 DCLRE1BQ9H816 532 aa13.53□□□□□ -0.24
BRCC3-202ENST00000340647 IGHV3-43A0A0B4J1X8 118 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 C12orf77C9JDV5 145 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 MYL12BO14950 172 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 ORC5O43913 435 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 IGHV3-43DP0DP04 118 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 GZMHP20718 246 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 SLC35A2P78381 396 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 EBI3Q14213 229 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 OXLD1Q5BKU9 147 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 Q6ZPA2 131 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 LINC00311Q8N616 119 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 OR52M1Q8NGK5 317 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 ARL11Q969Q4 196 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 RPEQ96AT9 228 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 MRPS24Q96EL2 167 aaKnown RBP13.52□□□□□ -0.25
BRCC3-202ENST00000340647 GFOD1Q9NXC2 390 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 CKLFQ9UBR5 152 aa13.52□□□□□ -0.25
BRCC3-202ENST00000340647 PTGES3LE9PB15 166 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 MGMTP16455 207 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 RCC1P18754 421 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-202ENST00000340647 EMX1Q04741 257 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-202ENST00000340647 ZNF816Q0VGE8 651 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-202ENST00000340647 MADCAM1Q13477 382 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 ACSM3Q53FZ2 586 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 SYT6Q5T7P8 510 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-202ENST00000340647 AWAT2Q6E213 333 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 OR10K2Q6IF99 312 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 RAB12Q6IQ22 244 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 CCDC144NLQ6NUI1 221 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 Q8N6K4 173 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 C5orf56Q8N8D9 126 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 OR4K15Q8NH41 348 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 S100A13Q99584 98 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 GFI1Q99684 422 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 SELENOIQ9C0D9 397 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 KCNK15Q9H427 330 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 DUSP21Q9H596 190 aa13.51□□□□□ -0.25
BRCC3-202ENST00000340647 AMMECR1Q9Y4X0 333 aaPredicted RBP13.51□□□□□ -0.25
BRCC3-202ENST00000340647 IGHV1-3A0A0C4DH29 117 aa13.5□□□□□ -0.25
BRCC3-202ENST00000340647 LINC01548A6NM66 108 aa13.5□□□□□ -0.25
BRCC3-202ENST00000340647 ZNF736B4DX44 427 aaPredicted RBP13.5□□□□□ -0.25
BRCC3-202ENST00000340647 PRB2P02812 416 aaPredicted RBP13.5□□□□□ -0.25
BRCC3-202ENST00000340647 MNDAP41218 407 aa13.5□□□□□ -0.25
BRCC3-202ENST00000340647 REG1BP48304 166 aa13.5□□□□□ -0.25
BRCC3-202ENST00000340647 GPR176Q14439 515 aa13.5□□□□□ -0.25
BRCC3-202ENST00000340647 OR8H3Q8N146 312 aa13.5□□□□□ -0.25
BRCC3-202ENST00000340647 C8orf31Q8N9H6 132 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms