RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PLAC9Q5JTB6 97 aa14.68□□□□□ -0.06
SSSCA1-201ENST00000309328 C1orf229Q6ZS94 237 aaPredicted RBP14.68□□□□□ -0.06
SSSCA1-201ENST00000309328 OR5H6Q8NGV6 325 aa14.68□□□□□ -0.06
SSSCA1-201ENST00000309328 CMSS1Q9BQ75 279 aaKnown RBP14.68□□□□□ -0.06
SSSCA1-201ENST00000309328 CHMP1AQ9HD42 196 aaPredicted RBP14.68□□□□□ -0.06
SSSCA1-201ENST00000309328 CALYQ9NYX4 217 aa14.68□□□□□ -0.06
SSSCA1-201ENST00000309328 COMMD3Q9UBI1 195 aa14.68□□□□□ -0.06
SSSCA1-201ENST00000309328 ADAM30Q9UKF2 790 aa14.68□□□□□ -0.06
SSSCA1-201ENST00000309328 TRAV40A0A0B4J280 105 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 NPIPB11E5RHQ5 1161 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 XRCC3O43542 346 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 TPPPO94811 219 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 CGB3P0DN86 165 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 CGB7P0DN87 165 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 PLA2G7Q13093 441 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 C9orf139Q6ZV77 190 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 RTN4RL2Q86UN3 420 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 C11orf42Q8N5U0 333 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 OR52M1Q8NGK5 317 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 OR13A1Q8NGR1 328 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 MRPL30Q8TCC3 161 aaKnown RBP14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 MRGPRDQ8TDS7 321 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 SIRT7Q9NRC8 400 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 AK3Q9UIJ7 227 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 NAV3Q8IVL0 2385 aa14.67□□□□□ -0.06
SSSCA1-201ENST00000309328 SONP18583 2426 aaKnown RBP14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 A0A075B6Q4 140 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 A0A087X0M5 115 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 IGHV1-69DA0A0B4J2H0 117 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 A0A1B0GX30 115 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 IGHV1-69P01742 117 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 GNB3P16520 340 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 DTYMKP23919 212 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 CDK2P24941 298 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 TALDO1P37837 337 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 MNDAP41218 407 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 ARFRP1Q13795 201 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 SRSF7Q16629 238 aaKnown RBP eCLIP14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 MOGAT2Q3SYC2 334 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 Q3ZCU0 254 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 MIDNQ504T8 468 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 HACD4Q5VWC8 232 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 ZNF880Q6PDB4 577 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 C15orf40Q8WUR7 153 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 TNFRSF14Q92956 283 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 LHX4Q969G2 390 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 ARL11Q969Q4 196 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 IDI2-AS1Q9NZ38 188 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 RABL2AQ9UBK7 228 aaPredicted RBP14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 RABL2BQ9UNT1 228 aa14.66□□□□□ -0.06
SSSCA1-201ENST00000309328 TEP1Q99973 2627 aaKnown RBP14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 CENPVL3A0A0U1RRI6 287 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 HOXB4P17483 251 aaPredicted RBP14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 CD34P28906 385 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 KIR2DS4P43632 304 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 KIR2DS1Q14954 304 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 C17orf58Q2M2W7 97 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 CDNFQ49AH0 187 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 TMEM69Q5SWH9 247 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 OR11H6Q8NGC7 330 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 OR4K15Q8NH41 348 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 CCDC107Q8WV48 283 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 DYRK2Q92630 601 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 CREB3L1Q96BA8 519 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 MS4A7Q9GZW8 240 aaPredicted RBP14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 TMEM133Q9H2Q1 129 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 KCNK7Q9Y2U2 307 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 A3GALT2U3KPV4 340 aa14.65□□□□□ -0.06
SSSCA1-201ENST00000309328 SVEP1Q4LDE5 3571 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 ANK3Q12955 4377 aaKnown RBP14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 F2RL2O00254 374 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 DIRAS3O95661 229 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 MELTFP08582 738 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 EPHA1P21709 976 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 GNG2P59768 71 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 ZNF260Q3ZCT1 412 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 KLF17Q5JT82 389 aaPredicted RBP14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 STEAP3Q658P3 488 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 ZNF596Q8TC21 504 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 KIRREL1Q96J84 757 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 CLEC7AQ9BXN2 247 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 TAF9BQ9HBM6 251 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 BATF3Q9NR55 127 aa14.64□□□□□ -0.07
SSSCA1-201ENST00000309328 ARHGAP32A7KAX9 2087 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 TRAV18A0A075B6X5 111 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 DPPA5A6NC42 116 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 C12orf77C9JDV5 145 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 RNASEK-C17orf49H0YIS7 233 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 C15orf65H3BRN8 121 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 IFNA2P01563 188 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 IGHV4-38-2P0DP08 117 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 SSTR5P35346 364 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 CBX5P45973 191 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 LGALS4P56470 323 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 HTD2P86397 168 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 HMGN3Q15651 99 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 PRAMEF5Q5TYX0 476 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 BAIAP2L2Q6UXY1 529 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 Q6ZS49 121 aa14.63□□□□□ -0.07
SSSCA1-201ENST00000309328 GALMQ96C23 342 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms