RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 TUBA4BQ9H853 241 aa6.02□□□□□ -1.44
GAPVD1-202ENST00000297933 ZNF586Q9NXT0 402 aa6.02□□□□□ -1.44
GAPVD1-202ENST00000297933 FRRS1LQ9P0K9 344 aa6.02□□□□□ -1.44
GAPVD1-202ENST00000297933 KIAA1217Q5T5P2 1943 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 IGHV3-72A0A0B4J1Y9 119 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 C9orf170A2RU37 121 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 FAM181BA6NEQ2 426 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 HTR1DP28221 377 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 HMGA2P52926 109 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 ARF6P62330 175 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 CEACAM21Q3KPI0 293 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 FAM106AQ4KMX7 169 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 OR8D4Q8NGM9 314 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 RNF133Q8WVZ7 376 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 POM121Q96HA1 1249 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 EAF1Q96JC9 268 aaPredicted RBP6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 GUCD1Q96NT3 240 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 CCL28Q9NRJ3 127 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 A0A1W2PPQ1 181 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 WNT9BO14905 357 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 SOCS1O15524 211 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 CTSDP07339 412 aaPredicted RBP6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 TRAPPC2P0DI81 140 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 TRAPPC2BP0DI82 140 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 PPP1CCP36873 323 aaKnown RBP6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 INSL4Q14641 139 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 GVQW1Q8N7I0 195 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 DRAXINQ8NBI3 349 aaPredicted RBP6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 ZNF418Q8TF45 676 aaPredicted RBP6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 FAM168AQ92567 244 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 CHST5Q9GZS9 411 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 TMPRSS5Q9H3S3 457 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 OR2W1Q9Y3N9 320 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 PTPRZ1P23471 2315 aaPredicted RBP6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 J3QR06 171 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 ADAM10O14672 748 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 GLDNQ6ZMI3 551 aaPredicted RBP6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 CALHM1Q8IU99 346 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 OR8G5Q8NG78 346 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 OR4P4Q8NGL7 312 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 DUX5Q96PT3 197 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 ZNF426Q9BUY5 554 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 KCNK15Q9H427 330 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 MTFP1Q9UDX5 166 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 TRPM6Q9BX84 2022 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 MAP1LC3B2A6NCE7 125 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 KIR2DL2P43627 348 aaPredicted RBP6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 SMAGPQ0VAQ4 97 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 PPP1R1AQ13522 171 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 TM4SF20Q53R12 229 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 LINC00299Q6ZSB3 139 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 BVESQ8NE79 360 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 SLC26A10Q8NG04 563 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 SNX22Q96L94 193 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 MAP1LC3BQ9GZQ8 125 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 SIRT7Q9NRC8 400 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 NEU3Q9UQ49 428 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 WASHC3Q9Y3C0 194 aa6.02□□□□□ -1.45
GAPVD1-202ENST00000297933 TO15178 435 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 ZNHIT1O43257 154 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 TGOLN2O43493 480 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 ZNF737O75373 536 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 SMIM18P0DKX4 95 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 RPL27AP46776 148 aaKnown RBP6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 LY6DQ14210 128 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 INPP5JQ15735 1006 aaPredicted RBP6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 PPP1R32Q7Z5V6 425 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 PRSS3P2Q8NHM4 247 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 FAM57AQ8TBR7 257 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 IL22RA2Q969J5 263 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 RAX2Q96IS3 184 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 C16orf92Q96LL3 132 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 NKX6-2Q9C056 277 aaPredicted RBP6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 HIGD1AQ9Y241 93 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 UBE2L6O14933 153 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 SYNGR2O43760 224 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 NDUFB6O95139 128 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 G0S2P27469 103 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 ATP5G2Q06055 141 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 OR2C3Q8N628 320 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 TPRX1Q8N7U7 411 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 OR4D11Q8NGI4 311 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 OR10J6PQ8NGY7 276 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 TDRD15B5MCY1 1934 aaKnown RBP6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 LIPFP07098 398 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 RPEL1Q2QD12 228 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 OR4A5Q8NH83 315 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 DDB2Q92466 427 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 IDI2-AS1Q9NZ38 188 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 CST4P01036 141 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 PPYP01298 95 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 FGF9P31371 208 aaPredicted RBP6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 DYNLT3P51808 116 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 TIAL1Q01085 375 aaKnown RBP eCLIP6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 ACSF3Q4G176 576 aaPredicted RBP6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 PDZD11Q5EBL8 140 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 OR52M1Q8NGK5 317 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 LILRB4Q8NHJ6 448 aa6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 NEU4Q8WWR8 484 aaPredicted RBP6.01□□□□□ -1.45
GAPVD1-202ENST00000297933 JMJD8Q96S16 334 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms