RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 VSIG4Q9Y279 399 aa15.08■□□□□ 0
SHANK1-201ENST00000293441 OR5AL1P0C617 328 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 INPP5JQ15735 1006 aaPredicted RBP15.07■□□□□ 0
SHANK1-201ENST00000293441 TPRX1Q8N7U7 411 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 AHRRA9YTQ3 701 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 SPCS3P61009 180 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 GABRA6Q16445 453 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 DGAT2L7PQ6IED9 249 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 MS4A3Q96HJ5 214 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 P2RX4Q99571 388 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 ADAMTS7Q9UKP4 1686 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 TDRD6O60522 2096 aaKnown RBP15.07■□□□□ 0
SHANK1-201ENST00000293441 FCN1O00602 326 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 ORM1P02763 201 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 PSG2P11465 335 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 FCARP24071 287 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 PAFAH1B2P68402 229 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 DOLPP1Q86YN1 238 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 ADAD2Q8NCV1 583 aaKnown RBP15.07■□□□□ 0
SHANK1-201ENST00000293441 OR4A4PQ8NGN8 299 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 PRR33A8MZF0 331 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 HOXD4P09016 255 aaPredicted RBP15.07■□□□□ 0
SHANK1-201ENST00000293441 CCDC144NLQ6NUI1 221 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 OR1K1Q8NGR3 316 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 ZNF714Q96N38 554 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 PRSS44E7EML9 344 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 NQO2P16083 231 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 P2RY1P47900 373 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 ERVFRD-1P60508 538 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 LURAP1Q96LR2 239 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 CISD1Q9NZ45 108 aaKnown RBP15.07■□□□□ 0
SHANK1-201ENST00000293441 KLHDC2Q9Y2U9 406 aa15.07■□□□□ 0
SHANK1-201ENST00000293441 C10orf113Q5VZT2 155 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 ANGPTL4Q9BY76 406 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 SLC35B3Q9H1N7 401 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 TEX30Q5JUR7 227 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 SEZ6L2Q6UXD5 910 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 TSPAN2O60636 221 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 HOXA4Q00056 320 aaPredicted RBP15.06■□□□□ 0
SHANK1-201ENST00000293441 OR51B2Q9Y5P1 312 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 KIF13BQ9NQT8 1826 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 FAM219AQ8IW50 185 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 SLC2A9Q9NRM0 540 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 PILRAQ9UKJ1 303 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 CTDSPLO15194 276 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 MGPP08493 103 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 TMEM97Q5BJF2 176 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 PARP11Q9NR21 331 aa15.06■□□□□ 0
SHANK1-201ENST00000293441 KLHDC1Q8N7A1 406 aa15.05■□□□□ 0
SHANK1-201ENST00000293441 RNF224P0DH78 156 aa15.05■□□□□ 0
SHANK1-201ENST00000293441 G0S2P27469 103 aa15.05■□□□□ 0
SHANK1-201ENST00000293441 ZP4Q12836 540 aa15.05■□□□□ 0
SHANK1-201ENST00000293441 CDCP2Q5VXM1 449 aa15.05■□□□□ 0
SHANK1-201ENST00000293441 EAF1Q96JC9 268 aaPredicted RBP15.05■□□□□ 0
SHANK1-201ENST00000293441 TMEM74BQ9NUR3 256 aa15.05■□□□□ 0
SHANK1-201ENST00000293441 LOXL3P58215 753 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 OR1L8Q8NGR8 309 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 FAM222BQ8WU58 562 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 MRPL24Q96A35 216 aaKnown RBP15.05■□□□□ -0
SHANK1-201ENST00000293441 WASHC3Q9Y3C0 194 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 C1QCP02747 245 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 VSIG8P0DPA2 414 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 NAT2P11245 290 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 DIRC2Q96SL1 478 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 MANBALQ9NQG1 85 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 RAG2P55895 527 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 ERVS71-1P61550 626 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 SSX8Q7RTT4 187 aa15.05■□□□□ -0
SHANK1-201ENST00000293441 NKX2-6A6NCS4 301 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 OR2T8A6NH00 312 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 PRR19A6NJB7 356 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 CTSSP25774 331 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 SURF2Q15527 256 aaPredicted RBP15.04■□□□□ -0
SHANK1-201ENST00000293441 GPA33Q99795 319 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 VAMP8Q9BV40 100 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 PARD6AQ9NPB6 346 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 DCAF16Q9NXF7 216 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 DAOP14920 347 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 NFAM1Q8NET5 270 aaPredicted RBP15.04■□□□□ -0
SHANK1-201ENST00000293441 ITLN1Q8WWA0 313 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 IGHV3-72A0A0B4J1Y9 119 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 TEX50A0A1B0GTY4 177 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 K7N7A8 449 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 VAMP3Q15836 100 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 PERPQ96FX8 193 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 TRBV5-3A0A0A0MS03 114 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 USF1P22415 310 aaPredicted RBP15.04■□□□□ -0
SHANK1-201ENST00000293441 WNT5AP41221 380 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 RBM11P57052 281 aaKnown RBP15.04■□□□□ -0
SHANK1-201ENST00000293441 C16orf82Q7Z2V1 217 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 LYZL2Q7Z4W2 148 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 PGLYRP3Q96LB9 341 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 J3QR06 171 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 TCL1AP56279 114 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 C19orf35Q6ZS72 473 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 ZNF596Q8TC21 504 aa15.04■□□□□ -0
SHANK1-201ENST00000293441 P2RY6Q15077 328 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 FAM27BQ5VT28 67 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 RAB33BQ9H082 229 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 SF3B6Q9Y3B4 125 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms