RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 WSB1Q9Y6I7 421 aa11.59□□□□□ -0.55
VHL-201ENST00000256474 ZNF503-AS2A6NEH8 195 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 STX12Q86Y82 276 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 OR10J5Q8NHC4 309 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 SLC25A31Q9H0C2 315 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 CSMD1Q96PZ7 3565 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 IGHV3-13P01766 116 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 IGHV3-7P01780 117 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 CEBPDP49716 269 aaPredicted RBP11.58□□□□□ -0.56
VHL-201ENST00000256474 DLK1P80370 383 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 ZNF239Q16600 458 aaKnown RBP11.58□□□□□ -0.56
VHL-201ENST00000256474 C20orf204Q6ZNR8 217 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 SELENOHQ8IZQ5 122 aaKnown RBP11.58□□□□□ -0.56
VHL-201ENST00000256474 CT55Q8WUE5 264 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 TCTEX1D2Q8WW35 142 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 GALNT14Q96FL9 552 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 CACNG5Q9UF02 275 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 PILRBQ9UKJ0 227 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 LOXL2Q9Y4K0 774 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 TGIF2-C20orf24A0A0A6YYL0 155 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 A0A0G2JRQ6 117 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 SOX15O60248 233 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 TIPARPQ7Z3E1 657 aaKnown RBP11.58□□□□□ -0.56
VHL-201ENST00000256474 PPP1R32Q7Z5V6 425 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 M1APQ8TC57 530 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 WDR54Q9H977 334 aa11.58□□□□□ -0.56
VHL-201ENST00000256474 GTF3C1Q12789 2109 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 LRRC3CA6NJW4 275 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 IFNA4P05014 189 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 S100GP29377 79 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 PMS2CLQ68D20 193 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 FAM53AQ6NSI3 398 aaPredicted RBP11.57□□□□□ -0.56
VHL-201ENST00000256474 GCNT2Q8N0V5 402 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 RNF138Q8WVD3 245 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 GINS3Q9BRX5 216 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 NIPSNAP3BQ9BS92 247 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 CADP27708 2225 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 ANKRD30BLA7E2S9 258 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 CD300LBA8K4G0 201 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 RPL36A-HNRNPH2H7BZ11 118 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 LY86O95711 162 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 IFNA17P01571 189 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 MMP9P14780 707 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 B3GALT5-AS1P59052 145 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 RPS23P62266 143 aaKnown RBP11.57□□□□□ -0.56
VHL-201ENST00000256474 HERPUD1Q15011 391 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 ZNF665Q9H7R5 613 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 CEBPZOSA8MTT3 80 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 HPSE2Q8WWQ2 592 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 FAM234AQ9H0X4 552 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 FZR1Q9UM11 496 aa11.57□□□□□ -0.56
VHL-201ENST00000256474 STRAPQ9Y3F4 350 aaKnown RBP11.57□□□□□ -0.56
VHL-201ENST00000256474 CLN5O75503 358 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 HIST1H3AP68431 136 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 RHEBQ15382 184 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 HMGN3Q15651 99 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 HIST2H3PS2Q5TEC6 136 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 SF3B5Q9BWJ5 86 aaKnown RBP11.56□□□□□ -0.56
VHL-201ENST00000256474 VSIRQ9H7M9 311 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 LOC102723996A0A087X1L8 192 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 DEGS1O15121 323 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 S100A2P29034 98 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 IDH3GP51553 393 aaPredicted RBP11.56□□□□□ -0.56
VHL-201ENST00000256474 TMEM211Q6ICI0 200 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 APH1AQ96BI3 265 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 C10orf35Q96D05 121 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 TMPRSS5Q9H3S3 457 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 UFSP2Q9NUQ7 469 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 PRSS50Q9UI38 385 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 TTC28Q96AY4 2481 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 FAM157AC9JC47 383 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 KRASP01116 189 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 RAB2AP61019 212 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 TPRX1Q8N7U7 411 aa11.56□□□□□ -0.56
VHL-201ENST00000256474 FGF23Q9GZV9 251 aaPredicted RBP11.56□□□□□ -0.56
VHL-201ENST00000256474 CEP192Q8TEP8 1941 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 DEFA4P12838 97 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 APLNRP35414 380 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 ZNF816Q0VGE8 651 aaPredicted RBP11.55□□□□□ -0.56
VHL-201ENST00000256474 USF2Q15853 346 aaPredicted RBP11.55□□□□□ -0.56
VHL-201ENST00000256474 ZNF880Q6PDB4 577 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 OR4D5Q8NGN0 318 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 KCNE4Q8WWG9 221 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 Q9N2K0 584 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 GSN-AS1Q9NRJ2 163 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 BOKQ9UMX3 212 aaPredicted RBP11.55□□□□□ -0.56
VHL-201ENST00000256474 IGKV1-6A0A0C4DH72 117 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 CLDN1O95832 211 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 ATP1A1-AS1Q5TC04 95 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 TMPRSS7Q7RTY8 843 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 CLDN23Q96B33 292 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 S100PBPQ96BU1 408 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 GPR146Q96CH1 333 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 K7N7A8 449 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 VDAC1P21796 283 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 ERVS71-1P61550 626 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 PMP22Q01453 160 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
VHL-201ENST00000256474 C6orf15Q6UXA7 325 aaPredicted RBP11.55□□□□□ -0.56
VHL-201ENST00000256474 AURKAIP1Q9NWT8 199 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms