RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 RABL2BQ9UNT1 228 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 AUP1Q9Y679 476 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 MTORP42345 2549 aa11.58□□□□□ -0.56
VPS25-201ENST00000253794 hCG_1809904A0A1W2PP81 198 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 A0A1W2PPE2 198 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 A0A1W2PR64 198 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 A0A1W2PRV1 198 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 C15orf65H3BRN8 121 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 CLPXO76031 633 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 AVPP01185 164 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 HLA-DQB1P01920 261 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 CD3GP09693 182 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 CCL3L1P16619 93 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 TAS2R20P59543 309 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 ARF6P62330 175 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 TMEM30BQ3MIR4 351 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 TMEM69Q5SWH9 247 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 METTL11BQ5VVY1 283 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 BAIAP2L2Q6UXY1 529 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 C1orf229Q6ZS94 237 aaPredicted RBP11.57□□□□□ -0.56
VPS25-201ENST00000253794 TNFRSF14Q92956 283 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 C6orf62Q9GZU0 229 aaPredicted RBP11.57□□□□□ -0.56
VPS25-201ENST00000253794 ZMAT3Q9HA38 289 aaKnown RBP11.57□□□□□ -0.56
VPS25-201ENST00000253794 RAB9BQ9NP90 201 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 CALYQ9NYX4 217 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 ONECUT1Q9UBC0 465 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 HIVEP2P31629 2446 aa11.57□□□□□ -0.56
VPS25-201ENST00000253794 WNK2Q9Y3S1 2297 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 A0A087X0M5 115 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 A0A1B0GX30 115 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 TMEM235A6NFC5 223 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 C12orf77C9JDV5 145 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 F2RL2O00254 374 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 RGS5O15539 181 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 SSX5O60225 188 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 TOX4O94842 621 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 FCGR3AP08637 254 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 RCC1P18754 421 aaPredicted RBP11.56□□□□□ -0.56
VPS25-201ENST00000253794 GLP1RP43220 463 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 ERVFRD-1P60508 538 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 HMGN3Q15651 99 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 CNPY1Q3B7I2 92 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 FAHD2BQ6P2I3 314 aaPredicted RBP11.56□□□□□ -0.56
VPS25-201ENST00000253794 CNIH2Q6PI25 160 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 LINC00299Q6ZSB3 139 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 TRAPPC6BQ86SZ2 158 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 OR52M1Q8NGK5 317 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 OR4K15Q8NH41 348 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 MRGPRDQ8TDS7 321 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 C15orf40Q8WUR7 153 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 FAHD2AQ96GK7 314 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 SOSTQ9BQB4 213 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 HDHD3Q9BSH5 251 aaPredicted RBP11.56□□□□□ -0.56
VPS25-201ENST00000253794 Q9N2K0 584 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 ING3Q9NXR8 418 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 EXTL2Q9UBQ6 330 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 ELF5Q9UKW6 265 aaPredicted RBP11.56□□□□□ -0.56
VPS25-201ENST00000253794 TRAPPC2LQ9UL33 140 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 ANAPC10Q9UM13 185 aa11.56□□□□□ -0.56
VPS25-201ENST00000253794 FAM25AB3EWG3 89 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 FAM25CB3EWG5 89 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 FAM25GB3EWG6 89 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 DIRAS3O95661 229 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 IGHV1-8P0DP01 117 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 CD34P28906 385 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 TNFSF8P32971 234 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 SSTR5P35346 364 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 TALDO1P37837 337 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 MRPS15P82914 257 aaKnown RBP11.55□□□□□ -0.56
VPS25-201ENST00000253794 Q3ZCU0 254 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 NCR3LG1Q68D85 454 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 VMO1Q7Z5L0 202 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 CCDC107Q8WV48 283 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 OCSTAMPQ9BR26 566 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 GSX1Q9H4S2 264 aaPredicted RBP11.55□□□□□ -0.56
VPS25-201ENST00000253794 SCPEP1Q9HB40 452 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 TAF9BQ9HBM6 251 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 CHMP1AQ9HD42 196 aaPredicted RBP11.55□□□□□ -0.56
VPS25-201ENST00000253794 YAE1D1Q9NRH1 226 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 SESN1Q9Y6P5 492 aa11.55□□□□□ -0.56
VPS25-201ENST00000253794 TRAV39A0A0B4J263 110 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 SULT1C2O00338 296 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 SPINT2O43291 252 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 HOXB4P17483 251 aaPredicted RBP11.54□□□□□ -0.56
VPS25-201ENST00000253794 FPR2P25090 351 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 CBX5P45973 191 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 GNG2P59768 71 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 BPIFB3P59826 476 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 HLA-DRB3P79483 266 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 HTD2P86397 168 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 ARFRP1Q13795 201 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 FAM120AOSQ5T036 256 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 OR52W1Q6IF63 320 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 HCP5Q6MZN7 132 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 CCDC190Q86UF4 302 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 IZUMO1Q8IYV9 350 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 OR6Q1Q8NGQ2 317 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 NUDCD2Q8WVJ2 157 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 ARL11Q969Q4 196 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 KIRREL1Q96J84 757 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms