RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PRSS23O95084 383 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 MRPL54Q6P161 138 aaKnown RBP10.11□□□□□ -0.79
LAMA4-201ENST00000230538 ISOC2Q96AB3 205 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 PCDHGA9Q9Y5G4 932 aaKnown RBP10.11□□□□□ -0.79
LAMA4-201ENST00000230538 HELTA6NFD8 242 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 PAGE4O60829 102 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 PSG2P11465 335 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 TMEM50BP56557 158 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 ZAR1Q86SH2 424 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 BVESQ8NE79 360 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 GPX7Q96SL4 187 aaPredicted RBP10.11□□□□□ -0.79
LAMA4-201ENST00000230538 A0A1B0GU03 582 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 MFSD2BA6NFX1 497 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 SMPD2O60906 423 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 HIST1H1EP10412 219 aaKnown RBP10.11□□□□□ -0.79
LAMA4-201ENST00000230538 TMEM255AQ5JRV8 349 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 INO80CQ6PI98 192 aaPredicted RBP10.11□□□□□ -0.79
LAMA4-201ENST00000230538 LYZL2Q7Z4W2 148 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 TMEM218A2RU14 115 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 SYNGR1O43759 233 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 AESQ08117 197 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 KLF9Q13886 244 aaPredicted RBP10.11□□□□□ -0.79
LAMA4-201ENST00000230538 FAM74A3Q4VXF1 159 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 CCL27Q9Y4X3 112 aa10.11□□□□□ -0.79
LAMA4-201ENST00000230538 A0A1W2PPV9 198 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 ECSCRQ19T08 205 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 WFDC3Q8IUB2 231 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 ZBTB34Q8NCN2 500 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 NFAM1Q8NET5 270 aaPredicted RBP10.1□□□□□ -0.79
LAMA4-201ENST00000230538 OR1K1Q8NGR3 316 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 DAOP14920 347 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 HSPB8Q9UJY1 196 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 TRAV8-7A0A075B6U6 113 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 TRAV39A0A0B4J263 110 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 OR4C45A6NMZ5 311 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 KCNAB3O43448 404 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 APCSP02743 223 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 NAT1P18440 290 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 WNT5AP41221 380 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 MDP1Q86V88 176 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 FAM222BQ8WU58 562 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 SMIM12Q96EX1 92 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 GMPPAQ96IJ6 420 aaPredicted RBP10.1□□□□□ -0.79
LAMA4-201ENST00000230538 RABAC1Q9UI14 185 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 OR51B2Q9Y5P1 312 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 SCN1AP35498 2009 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 CD82P27701 267 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 MEOX2P50222 304 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 B2MP61769 119 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 COL10A1Q03692 680 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 CLPPQ16740 277 aaPredicted RBP10.1□□□□□ -0.79
LAMA4-201ENST00000230538 LGALSLQ3ZCW2 172 aaPredicted RBP10.1□□□□□ -0.79
LAMA4-201ENST00000230538 ZNF880Q6PDB4 577 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 TEPPQ6URK8 271 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 C9orf40Q8IXQ3 194 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 RNF133Q8WVZ7 376 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 SNRNP40Q96DI7 357 aaKnown RBP10.1□□□□□ -0.79
LAMA4-201ENST00000230538 MS4A5Q9H3V2 200 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 C1QCP02747 245 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 PEBP1P30086 187 aaKnown RBP10.1□□□□□ -0.79
LAMA4-201ENST00000230538 HOXA4Q00056 320 aaPredicted RBP10.1□□□□□ -0.79
LAMA4-201ENST00000230538 ZNF441Q8N8Z8 693 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 MYOZ3Q8TDC0 251 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 PACRGQ96M98 296 aaPredicted RBP10.1□□□□□ -0.79
LAMA4-201ENST00000230538 TRAF4Q9BUZ4 470 aaPredicted RBP10.1□□□□□ -0.79
LAMA4-201ENST00000230538 CHST5Q9GZS9 411 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 FUT9Q9Y231 359 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 RGPD4Q7Z3J3 1758 aa10.1□□□□□ -0.79
LAMA4-201ENST00000230538 LOC102724200A0A096LPH7 203 aaPredicted RBP10.09□□□□□ -0.79
LAMA4-201ENST00000230538 PGA4P0DJD7 388 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 PGA5P0DJD9 388 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 C16orf82Q7Z2V1 217 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 CBLN2Q8IUK8 224 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 OR2D3Q8NGH3 330 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 OR1L8Q8NGR8 309 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 SNX22Q96L94 193 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 CDX2Q99626 313 aaPredicted RBP10.09□□□□□ -0.79
LAMA4-201ENST00000230538 SCN9AQ15858 1988 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 MGAT2Q10469 447 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 FBXW9Q5XUX1 488 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 POM121Q96HA1 1249 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 SLC25A10Q9UBX3 287 aaPredicted RBP10.09□□□□□ -0.79
LAMA4-201ENST00000230538 KIAA1217Q5T5P2 1943 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 ARFGEF1Q9Y6D6 1849 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 CORTO00230 105 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 ISLRO14498 428 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 VSIG8P0DPA2 414 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 ID1P41134 155 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 SULT1A2P50226 295 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 PAFAH1B2P68402 229 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 MRGPRGQ86SM5 289 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 OR5AU1Q8NGC0 362 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 TMEM140Q9NV12 185 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 MIA3Q5JRA6 1907 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 IGHV3-21A0A0B4J1V1 117 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 CD1BP29016 333 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 EFNB2P52799 333 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 IRF3Q14653 427 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 OR8A1Q8NGG7 326 aa10.09□□□□□ -0.79
LAMA4-201ENST00000230538 RCC2Q9P258 522 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms