RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 NTN3O00634 580 aaPredicted RBP10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 HLA-GP17693 338 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 GPR12P47775 334 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 NPBWR1P48145 328 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 NDUFA6P56556 154 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 CPEB3Q8NE35 698 aaKnown RBP10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 PRDM14Q9GZV8 571 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 PARP11Q9NR21 331 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 ZNF716A6NP11 495 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 SEC11BP0C7V7 166 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 ATP6V0CP27449 155 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 FHITP49789 147 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 RUNX1Q01196 453 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 SMIM21Q3B7S5 101 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 AWAT1Q58HT5 328 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 RAB40CQ96S21 281 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 DDA1Q9BW61 102 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 OR2D2Q9H210 308 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 PINLYPA6NC86 204 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 ZNF727A8MUV8 499 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 G3V3Q6 166 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 PSG2P11465 335 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 KCNJ3P48549 501 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 FOXO1Q12778 655 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 MOB1BQ7L9L4 216 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 TMEM105Q8N8V8 129 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 PFDN5Q99471 154 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 MSL2Q9HCI7 577 aa10.64□□□□□ -0.71
TM9SF4-201ENST00000217315 GAPDHP04406 335 aaKnown RBP10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 ZNF83P51522 516 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 RPP30P78346 268 aaKnown RBP10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 IZUMO4Q1ZYL8 232 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 EIF2S3LQ2VIR3 472 aaKnown RBP10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 TMEM252Q8N6L7 170 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 RPUSD4Q96CM3 377 aaKnown RBP10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 TP53RKQ96S44 253 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 C12orf57Q99622 126 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 ZNF703Q9H7S9 590 aaPredicted RBP10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 GCM1Q9NP62 436 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 FOXD3Q9UJU5 478 aaPredicted RBP10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 LIPGQ9Y5X9 500 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 NOVA1P51513 510 aaKnown RBP10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 TAS2R30P59541 319 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 HLA-DRB3P79483 266 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 TMEM187Q14656 261 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 FRZBQ92765 325 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 TMEM222Q9H0R3 208 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 HEATR1Q9H583 2144 aaKnown RBP10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 C7orf77A4D0Y5 90 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 SYNGR2O43760 224 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 ACP1P24666 158 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 PMELP40967 661 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 HOXA1P49639 335 aaPredicted RBP10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 PSMB3P49720 205 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 SUPT4H1P63272 117 aaKnown RBP10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 SPINK9Q5DT21 86 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 RAB9BQ9NP90 201 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 IL36RNQ9UBH0 155 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 PSG11Q9UQ72 335 aa10.63□□□□□ -0.71
TM9SF4-201ENST00000217315 LRRC3CA6NJW4 275 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 SPRY3O43610 288 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 ACTL6BO94805 426 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 F2RP25116 425 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 FOXG1P55316 489 aaPredicted RBP10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 CLEC12BQ2HXU8 276 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 LDLRAD3Q86YD5 345 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 HIPK2Q9H2X6 1198 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 ATPIF1Q9UII2 106 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 ATP23Q9Y6H3 246 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 NKX2-8O15522 239 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 CRYBA1P05813 215 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 RAB13P51153 203 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 SNRPEP62304 92 aaKnown RBP10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 CSRP2Q16527 193 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 TPRX1Q8N7U7 411 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 BMPERQ8N8U9 685 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 PLEKHA3Q9HB20 300 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 NIT2Q9NQR4 276 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 RCC2Q9P258 522 aaKnown RBP10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 LY6G6EA0A0G2JKS1 128 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 HOXA6P31267 233 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 FGF8P55075 233 aaPredicted RBP10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 Q3ZCU0 254 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 PDZD11Q5EBL8 140 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 HIST2H3AQ71DI3 136 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 OR1K1Q8NGR3 316 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 ZNF581Q9P0T4 197 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 U3KQA8 63 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 IGKV1-12A0A0C4DH73 117 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 C9orf172C9J069 976 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 C17orf112F2Z3M2 114 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 IGKV1D-12P01611 117 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 CRYGSP22914 178 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 MPZP25189 248 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 SNCAP37840 140 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 RPL19P84098 196 aaKnown RBP10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 HIST3H3Q16695 136 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 BTNL3Q6UXE8 466 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 ZNF429Q86V71 674 aa10.62□□□□□ -0.71
TM9SF4-201ENST00000217315 ZNF561Q8N587 486 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms