RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 PSG11Q9UQ72 335 aa13.06□□□□□ -0.32
COLCA2-207ENST00000639470 ST3GAL6Q9Y274 331 aa13.06□□□□□ -0.32
COLCA2-207ENST00000639470 EXOSC1Q9Y3B2 195 aaKnown RBP13.06□□□□□ -0.32
COLCA2-207ENST00000639470 A0A087X0M5 115 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 A0A1B0GX30 115 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 FUOMA2VDF0 154 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 LEUTXA8MZ59 168 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 TOR1AO14656 332 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 PIN1P1O15428 100 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 MAGEB3O15480 346 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 OR7C1O76099 320 aaPredicted RBP13.05□□□□□ -0.32
COLCA2-207ENST00000639470 IL1AP01583 271 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 MYL12AP19105 171 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 C21orf33P30042 268 aaPredicted RBP13.05□□□□□ -0.32
COLCA2-207ENST00000639470 BDKRB2P30411 391 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 ZNF93P35789 620 aaPredicted RBP13.05□□□□□ -0.32
COLCA2-207ENST00000639470 SLC22A6Q4U2R8 563 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 C11orf88Q6PI97 169 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 AHSA2Q719I0 299 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 RTN4RL2Q86UN3 420 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 OSR2Q8N2R0 312 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 OR52N1Q8NH53 320 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 OR56B4Q8NH76 319 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 CAPSLQ8WWF8 208 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 MUL1Q969V5 352 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 R3HDM4Q96D70 268 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 TMEM138Q9NPI0 162 aa13.05□□□□□ -0.32
COLCA2-207ENST00000639470 TRBV5-7A0A0A0MS05 114 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 IGHV3-43A0A0B4J1X8 118 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 A0A1W2PPI3 338 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 J3QR06 171 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 CD2P06729 351 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 SNRNP70P08621 437 aaKnown RBP13.04□□□□□ -0.32
COLCA2-207ENST00000639470 IGHV3-43DP0DP04 118 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 REG1BP48304 166 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 PPP3R1P63098 170 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 RIPK1Q13546 671 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 OR5AU1Q8NGC0 362 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 MYCBPQ99417 103 aaPredicted RBP13.04□□□□□ -0.32
COLCA2-207ENST00000639470 METTL9Q9H1A3 318 aa13.04□□□□□ -0.32
COLCA2-207ENST00000639470 TGP01266 2768 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 IGHV3-72A0A0B4J1Y9 119 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 NPIPB11E5RHQ5 1161 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 PEX14O75381 377 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 ALDOBP05062 364 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 CAPGP40121 348 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 HNF4GQ14541 408 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 C9orf152Q5JTZ5 239 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 OGFRL1Q5TC84 451 aaPredicted RBP13.03□□□□□ -0.32
COLCA2-207ENST00000639470 TTC23Q5W5X9 447 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 NDUFA11Q86Y39 141 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 DRAM1Q8N682 238 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 BPIFB6Q8NFQ5 453 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 OR9G1Q8NH87 305 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 TOMM40LQ969M1 308 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 RBM14Q96PK6 669 aaKnown RBP13.03□□□□□ -0.32
COLCA2-207ENST00000639470 BANF2Q9H503 90 aa13.03□□□□□ -0.32
COLCA2-207ENST00000639470 NKX1-2Q9UD57 310 aaPredicted RBP13.03□□□□□ -0.32
COLCA2-207ENST00000639470 PRKDCP78527 4128 aaKnown RBP13.03□□□□□ -0.32
COLCA2-207ENST00000639470 C15orf65H3BRN8 121 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 SLC31A2O15432 143 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 OR2F2O95006 317 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 MAS1P04201 325 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 BRS3P32247 399 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 PRRX1P54821 245 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 Q499Y3 187 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 FAM27D1Q5T7N8 215 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 JAGN1Q8N5M9 183 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 TMEM104Q8NE00 496 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 RPEQ96AT9 228 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 BARHL1Q9BZE3 327 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 KCNK15Q9H427 330 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 LINC00574Q9H8X3 128 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 LIN7BQ9HAP6 207 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 IL36GQ9NZH8 169 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 PSORS1C1Q9UIG5 152 aa13.02□□□□□ -0.33
COLCA2-207ENST00000639470 MRPS28Q9Y2Q9 187 aaKnown RBP13.02□□□□□ -0.33
COLCA2-207ENST00000639470 CSTBP04080 98 aaKnown RBP13.01□□□□□ -0.33
COLCA2-207ENST00000639470 CELP19835 753 aa13.01□□□□□ -0.33
COLCA2-207ENST00000639470 GP2P55259 537 aaKnown RBP13.01□□□□□ -0.33
COLCA2-207ENST00000639470 CD83Q01151 205 aa13.01□□□□□ -0.33
COLCA2-207ENST00000639470 GLIPR1L1Q6UWM5 242 aa13.01□□□□□ -0.33
COLCA2-207ENST00000639470 C8orf59Q8N0T1 100 aaPredicted RBP13.01□□□□□ -0.33
COLCA2-207ENST00000639470 ZNF565Q8N9K5 539 aa13.01□□□□□ -0.33
COLCA2-207ENST00000639470 SETD9Q8NE22 299 aa13.01□□□□□ -0.33
COLCA2-207ENST00000639470 HAVCR2Q8TDQ0 301 aa13.01□□□□□ -0.33
COLCA2-207ENST00000639470 NEK7Q8TDX7 302 aa13.01□□□□□ -0.33
COLCA2-207ENST00000639470 FBLIM1Q8WUP2 373 aa13.01□□□□□ -0.33
COLCA2-207ENST00000639470 CPNE2Q96FN4 548 aaPredicted RBP13.01□□□□□ -0.33
COLCA2-207ENST00000639470 NOL4LQ96MY1 436 aaPredicted RBP13.01□□□□□ -0.33
COLCA2-207ENST00000639470 DERL3Q96Q80 235 aa13.01□□□□□ -0.33
COLCA2-207ENST00000639470 LINC00527Q9UJ94 153 aa13.01□□□□□ -0.33
COLCA2-207ENST00000639470 IRGMA1A4Y4 181 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 FAM90A18PA6NE21 464 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 FAM90A16PA6NEW6 464 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 FAM90A20PA6NIJ5 464 aa13□□□□□ -0.33
COLCA2-207ENST00000639470 FAM90A9PA6NNJ1 464 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms