RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 A0A1W2PQF6 199 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 PMCHP20382 165 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 EDDM3BP56851 147 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 CORO2AQ92828 525 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 GALMQ96C23 342 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 SCARF2Q96GP6 870 aaPredicted RBP12.78□□□□□ -0.36
VPS36-207ENST00000611132 TAAR6Q96RI8 345 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 GINS3Q9BRX5 216 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 TMEM222Q9H0R3 208 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 TUBD1Q9UJT1 453 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 MTCL1Q9Y4B5 1905 aaKnown RBP12.78□□□□□ -0.36
VPS36-207ENST00000611132 LOC101059948A0A1B0GTJ6 334 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 GCGP01275 180 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 FOLR2P14207 255 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 HIKESHIQ53FT3 197 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 C1orf53Q5VUE5 145 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 Q6ZS52 159 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 RTBDNQ9BSG5 229 aaPredicted RBP12.78□□□□□ -0.36
VPS36-207ENST00000611132 RTTNQ86VV8 2226 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 WDR90Q96KV7 1748 aa12.78□□□□□ -0.36
VPS36-207ENST00000611132 FCN1O00602 326 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 APOA2P02652 100 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 GPR12P47775 334 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 OR1P1Q8NH06 330 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 C12orf49Q9H741 205 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 PISDQ9UG56 409 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 RPH3ALQ9UNE2 315 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 CA11O75493 328 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 CRISP2P16562 243 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 SERF2P84101 59 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 SMAD4Q13485 552 aaKnown RBP12.77□□□□□ -0.36
VPS36-207ENST00000611132 CXorf66Q5JRM2 361 aaPredicted RBP12.77□□□□□ -0.36
VPS36-207ENST00000611132 IL17BQ9UHF5 180 aa12.77□□□□□ -0.36
VPS36-207ENST00000611132 C11orf94C9JXX5 98 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 HSBP1O75506 76 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 PIAS2O75928 621 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 CEACAM6P40199 344 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 ADIPOR1Q96A54 375 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 THOC3Q96J01 351 aaKnown RBP12.77□□□□□ -0.37
VPS36-207ENST00000611132 NAT8BQ9UHF3 227 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 OR7C2O60412 319 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 RPS23P62266 143 aaKnown RBP12.77□□□□□ -0.37
VPS36-207ENST00000611132 RAC1P63000 192 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 TMEM187Q14656 261 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 CNEP1R1Q8N9A8 125 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 ABHD14BQ96IU4 210 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 P4HTMQ9NXG6 502 aa12.77□□□□□ -0.37
VPS36-207ENST00000611132 SLC31A2O15432 143 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 IGHMP01871 453 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 RPLP1P05386 114 aaKnown RBP12.76□□□□□ -0.37
VPS36-207ENST00000611132 MPZP25189 248 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 MOB3AQ96BX8 217 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 RSG1Q9BU20 258 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 ANGPTL4Q9BY76 406 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 TMEM9BQ9NQ34 198 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 TNS1Q9HBL0 1735 aaKnown RBP12.76□□□□□ -0.37
VPS36-207ENST00000611132 TAS2R45P59539 299 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 FREM3P0C091 2139 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 KIAA1324LA8MWY0 1029 aaPredicted RBP12.76□□□□□ -0.37
VPS36-207ENST00000611132 BMP5P22003 454 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 C17orf51A8MQB3 221 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 HOXA6P31267 233 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 RHBDD2Q6NTF9 364 aa12.76□□□□□ -0.37
VPS36-207ENST00000611132 CTXND1A0A1B0GTU2 59 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 MEX3AA1L020 520 aaKnown RBP12.75□□□□□ -0.37
VPS36-207ENST00000611132 RRP8O43159 456 aaKnown RBP12.75□□□□□ -0.37
VPS36-207ENST00000611132 PAGE4O60829 102 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 CD5P06127 495 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 CNN1P51911 297 aaKnown RBP12.75□□□□□ -0.37
VPS36-207ENST00000611132 COL19A1Q14993 1142 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 MRGPRFQ96AM1 343 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 WBP1LQ9NX94 342 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 RPL36A-HNRNPH2H7BZ11 118 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 SLC25A47Q6Q0C1 308 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 RASL10BQ96S79 203 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 TRBV6-7A0A0A0MS04 114 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 HRASP01112 189 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 C21orf62-AS1Q17RA5 79 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 ZNF468Q5VIY5 522 aaPredicted RBP12.75□□□□□ -0.37
VPS36-207ENST00000611132 OR10G8Q8NGN5 311 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 OR5B3Q8NH48 314 aa12.75□□□□□ -0.37
VPS36-207ENST00000611132 GYPAP02724 150 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 AMTP48728 403 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 RBM11P57052 281 aaKnown RBP12.74□□□□□ -0.37
VPS36-207ENST00000611132 DCAF12Q5T6F0 453 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 TMPRSS7Q7RTY8 843 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 TBX15Q96SF7 602 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 DDA1Q9BW61 102 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 FAM166BA8MTA8 275 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 AQP7O14520 342 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 TFF2Q03403 129 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 PLPPR5Q32ZL2 321 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 RBMXL3Q8N7X1 1067 aaKnown RBP12.74□□□□□ -0.37
VPS36-207ENST00000611132 EDARADDQ8WWZ3 215 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 RAB24Q969Q5 203 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 Q96M66 194 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 MSL2Q9HCI7 577 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 CYTL1Q9NRR1 136 aa12.74□□□□□ -0.37
VPS36-207ENST00000611132 TAAR3PQ9P1P4 343 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms