RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 RHOFQ9HBH0 211 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 TINAGQ9UJW2 476 aa11.57□□□□□ -0.56
NEK3-205ENST00000610828 H7C1Q1 480 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 HSD17B6O14756 317 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 OR2H2O95918 312 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 MBPP02686 304 aaPredicted RBP11.56□□□□□ -0.56
NEK3-205ENST00000610828 CECR9P0C854 216 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 KCNJ3P48549 501 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 TMEM268Q5VZI3 342 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 OR52M1Q8NGK5 317 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 IL1F10Q8WWZ1 152 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 IFT22Q9H7X7 185 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 TAS2R3Q9NYW6 316 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 MUC6Q6W4X9 2439 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 CEP250Q9BV73 2442 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 GPR31O00270 319 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 TUSC2O75896 110 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 GLAP06280 429 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 PGA5P0DJD9 388 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 ERVK11-1P61568 191 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 BOLLQ8N9W6 283 aaKnown RBP11.56□□□□□ -0.56
NEK3-205ENST00000610828 SPERTQ8NA61 448 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 TMEM222Q9H0R3 208 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 CCL28Q9NRJ3 127 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 TMEM100Q9NV29 134 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 LUZP4Q9P127 313 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 FZR1Q9UM11 496 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 UBE2J1Q9Y385 318 aaPredicted RBP11.56□□□□□ -0.56
NEK3-205ENST00000610828 TMED3Q9Y3Q3 217 aa11.56□□□□□ -0.56
NEK3-205ENST00000610828 TRBV6-6A0A0A6YYG2 114 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 TRAV39A0A0B4J263 110 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 KRBOX1C9JBD0 128 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 HLA-DRB3P79483 266 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 TUSC1Q2TAM9 212 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 PCSK4Q6UW60 755 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 SEM1Q6ZVN7 128 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 LDLRAD3Q86YD5 345 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 PRR18Q8N4B5 295 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 EIF4E3Q8N5X7 224 aaKnown RBP11.55□□□□□ -0.56
NEK3-205ENST00000610828 OR4A4PQ8NGN8 299 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 OR10J5Q8NHC4 309 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 BOD1Q96IK1 185 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 KIRREL1Q96J84 757 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 NRIP2Q9BQI9 281 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 ZNF71Q9NQZ8 489 aaPredicted RBP11.55□□□□□ -0.56
NEK3-205ENST00000610828 ASF1BQ9NVP2 202 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 PCDHB10Q9UN67 800 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 GVINP1Q7Z2Y8 2422 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 B8ZZF3 427 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 SLC33A1O00400 549 aaPredicted RBP11.55□□□□□ -0.56
NEK3-205ENST00000610828 TAAR5O14804 337 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 MLNRO43193 412 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 CGAP01215 116 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 FABP6P51161 128 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 RPL7L1Q6DKI1 246 aaKnown RBP11.55□□□□□ -0.56
NEK3-205ENST00000610828 ZNF880Q6PDB4 577 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 Q6ZS92 163 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 ZNF695Q8IW36 515 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 CMTM1Q8IZ96 169 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 OR8G5Q8NG78 346 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 DNTTIP1Q9H147 329 aa11.55□□□□□ -0.56
NEK3-205ENST00000610828 PURGQ9UJV8 347 aaKnown RBP11.55□□□□□ -0.56
NEK3-205ENST00000610828 MBD3L4A6NDZ8 208 aaPredicted RBP11.54□□□□□ -0.56
NEK3-205ENST00000610828 MBD3L3A6NE82 208 aaPredicted RBP11.54□□□□□ -0.56
NEK3-205ENST00000610828 MBD3L5A6NJ08 208 aaPredicted RBP11.54□□□□□ -0.56
NEK3-205ENST00000610828 TMEM210A6NLX4 147 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 K7EM74 188 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 TNFSF12O43508 249 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 TIMM8AO60220 97 aaPredicted RBP11.54□□□□□ -0.56
NEK3-205ENST00000610828 M6PRP20645 277 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 MDH2P40926 338 aaKnown RBP11.54□□□□□ -0.56
NEK3-205ENST00000610828 SRPXP78539 464 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 ALKBH2Q6NS38 261 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 BHLHA15Q7RTS1 189 aaPredicted RBP11.54□□□□□ -0.56
NEK3-205ENST00000610828 OR1S2Q8NGQ3 325 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 MBD3L2Q8NHZ7 208 aaPredicted RBP11.54□□□□□ -0.56
NEK3-205ENST00000610828 SNIP1Q8TAD8 396 aaKnown RBP11.54□□□□□ -0.56
NEK3-205ENST00000610828 PLPPR1Q8TBJ4 325 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 RNF141Q8WVD5 230 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 SMIM3Q9BZL3 60 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 TAF9BQ9HBM6 251 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 OR14J1Q9UGF5 321 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 BSNQ9UPA5 3926 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 DCHS1Q96JQ0 3298 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.54□□□□□ -0.56
NEK3-205ENST00000610828 E5RGE8 158 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 SH2D1BO14796 132 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 TMEM33P57088 247 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 RND3P61587 244 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 ZNF146Q15072 292 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 P2RY6Q15077 328 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 BEND4Q6ZU67 534 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 USB1Q9BQ65 265 aaKnown RBP11.54□□□□□ -0.56
NEK3-205ENST00000610828 BCL2L14Q9BZR8 327 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 FBXL17Q9UF56 701 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 TRAPPC2LQ9UL33 140 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 NSG2Q9Y328 171 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 SPEF1Q9Y4P9 236 aa11.54□□□□□ -0.56
NEK3-205ENST00000610828 IGHV1-18A0A0C4DH31 117 aa11.53□□□□□ -0.56
NEK3-205ENST00000610828 OR5H1A6NKK0 313 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms