RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 SIGLEC9Q9Y336 463 aa18.23■□□□□ 0.51
CCDC9-204ENST00000599398 SLC35A2P78381 396 aa18.22■□□□□ 0.51
CCDC9-204ENST00000599398 INSL4Q14641 139 aa18.22■□□□□ 0.51
CCDC9-204ENST00000599398 MPV17LQ2QL34 196 aa18.22■□□□□ 0.51
CCDC9-204ENST00000599398 OR2T6Q8NHC8 308 aa18.22■□□□□ 0.51
CCDC9-204ENST00000599398 MRGPRDQ8TDS7 321 aa18.22■□□□□ 0.51
CCDC9-204ENST00000599398 NCOR1P1Q9H4R4 102 aa18.22■□□□□ 0.51
CCDC9-204ENST00000599398 RANBP3Q9H6Z4 567 aaPredicted RBP18.22■□□□□ 0.51
CCDC9-204ENST00000599398 IFT22Q9H7X7 185 aa18.22■□□□□ 0.51
CCDC9-204ENST00000599398 DPM3Q9P2X0 92 aa18.22■□□□□ 0.51
CCDC9-204ENST00000599398 FBLN5Q9UBX5 448 aa18.22■□□□□ 0.51
CCDC9-204ENST00000599398 LSM2Q9Y333 95 aaKnown RBP18.22■□□□□ 0.51
CCDC9-204ENST00000599398 DYNLT3P51808 116 aa18.21■□□□□ 0.51
CCDC9-204ENST00000599398 PRRX1P54821 245 aa18.21■□□□□ 0.51
CCDC9-204ENST00000599398 RBM39Q14498 530 aaKnown RBP18.21■□□□□ 0.51
CCDC9-204ENST00000599398 LTC4SQ16873 150 aa18.21■□□□□ 0.51
CCDC9-204ENST00000599398 ACSM3Q53FZ2 586 aa18.21■□□□□ 0.51
CCDC9-204ENST00000599398 CCBE1Q6UXH8 406 aaPredicted RBP18.21■□□□□ 0.51
CCDC9-204ENST00000599398 CDH26Q8IXH8 852 aa18.21■□□□□ 0.51
CCDC9-204ENST00000599398 MS4A15Q8N5U1 240 aa18.21■□□□□ 0.51
CCDC9-204ENST00000599398 NKAIN3Q8N8D7 197 aa18.21■□□□□ 0.51
CCDC9-204ENST00000599398 KIRREL1Q96J84 757 aa18.21■□□□□ 0.51
CCDC9-204ENST00000599398 WNK1Q9H4A3 2382 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 TRAV39A0A0B4J263 110 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 A6NDX4 124 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 LEUTXA8MZ59 168 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 TIMM23O14925 209 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 RGS10O43665 173 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 IL1AP01583 271 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 CGB3P0DN86 165 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 CGB7P0DN87 165 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 CD34P28906 385 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 KIR2DS4P43632 304 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 HSPA13P48723 471 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 PAX5Q02548 391 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 TREML4Q6UXN2 200 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 RFESDQ8TAC1 157 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 CCDC90BQ9GZT6 254 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 IDI2-AS1Q9NZ38 188 aa18.2■□□□□ 0.5
CCDC9-204ENST00000599398 TMEM30CPA0ZSE6 113 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 IGLV1-47P01700 117 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 CEACAM3P40198 252 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 ARHGDIBP52566 201 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 IRF3Q14653 427 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 HLA-DRB5Q30154 266 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 UTF1Q5T230 341 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 FAM27D1Q5T7N8 215 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 DTX3Q8N9I9 347 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 UFD1Q92890 307 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 CREB3L1Q96BA8 519 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 BANF2Q9H503 90 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 DUSP21Q9H596 190 aa18.19■□□□□ 0.5
CCDC9-204ENST00000599398 A0A087X0M5 115 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 A0A1B0GX30 115 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 MEGF11A6BM72 1044 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 H3BUI4 141 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 M0QZ24 198 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 CRTAPO75718 401 aaPredicted RBP18.18■□□□□ 0.5
CCDC9-204ENST00000599398 IGHV3-7P01780 117 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 HSMCR30P0CW71 290 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 SSTR5P35346 364 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 RBM48Q5RL73 367 aaKnown RBP18.18■□□□□ 0.5
CCDC9-204ENST00000599398 LIPKQ5VXJ0 399 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 OR9G1Q8NH87 305 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 LEAP2Q969E1 77 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 MRPS24Q96EL2 167 aaKnown RBP18.18■□□□□ 0.5
CCDC9-204ENST00000599398 CNBD2Q96M20 576 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 UQCC2Q9BRT2 126 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 SELENOIQ9C0D9 397 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 SPACA1Q9HBV2 294 aa18.18■□□□□ 0.5
CCDC9-204ENST00000599398 BUB1B-PAK6H3BSN5 160 aa18.17■□□□□ 0.5
CCDC9-204ENST00000599398 MGMTP16455 207 aa18.17■□□□□ 0.5
CCDC9-204ENST00000599398 BRS3P32247 399 aa18.17■□□□□ 0.5
CCDC9-204ENST00000599398 EFNB2P52799 333 aa18.17■□□□□ 0.5
CCDC9-204ENST00000599398 GPR50Q13585 617 aa18.17■□□□□ 0.5
CCDC9-204ENST00000599398 C11orf88Q6PI97 169 aa18.17■□□□□ 0.5
CCDC9-204ENST00000599398 UNQ9370/PRO34162Q6UXP9 181 aa18.17■□□□□ 0.5
CCDC9-204ENST00000599398 CEACAM19Q7Z692 300 aa18.17■□□□□ 0.5
CCDC9-204ENST00000599398 CCDC107Q8WV48 283 aa18.17■□□□□ 0.5
CCDC9-204ENST00000599398 TMEM203Q969S6 136 aa18.17■□□□□ 0.5
CCDC9-204ENST00000599398 MCRIP1C9JLW8 97 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 NPIPB11E5RHQ5 1161 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 CRHBPP24387 322 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 CD24P25063 80 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 GNG10P50151 68 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 HSD17B12Q53GQ0 312 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 TPTE2P1Q5T6R2 138 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 LYPD6Q86Y78 171 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 KLHDC1Q8N7A1 406 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 TMEM104Q8NE00 496 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 MMP28Q9H239 520 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 LINC00574Q9H8X3 128 aa18.16■□□□□ 0.5
CCDC9-204ENST00000599398 AMMECR1Q9Y4X0 333 aaPredicted RBP18.16■□□□□ 0.5
CCDC9-204ENST00000599398 J3QR06 171 aa18.15■□□□□ 0.5
CCDC9-204ENST00000599398 AIPO00170 330 aa18.15■□□□□ 0.5
CCDC9-204ENST00000599398 VSIG10L2P0DP72 767 aa18.15■□□□□ 0.5
CCDC9-204ENST00000599398 GZMHP20718 246 aa18.15■□□□□ 0.5
CCDC9-204ENST00000599398 GP2P55259 537 aaKnown RBP18.15■□□□□ 0.5
CCDC9-204ENST00000599398 HABP2Q14520 560 aaPredicted RBP18.15■□□□□ 0.5
CCDC9-204ENST00000599398 ARSJQ5FYB0 599 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms