RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 DEFB108BQ8NET1 73 aa17.37■□□□□ 0.37
PNKP-203ENST00000593946 RAB1BQ9H0U4 201 aa17.37■□□□□ 0.37
PNKP-203ENST00000593946 TRAV38-1A0A0B4J264 116 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 C7orf66A4D0T2 115 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 CEACAM18A8MTB9 384 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 K7N7A8 449 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 FABP7O15540 132 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 AESQ08117 197 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 CARTPTQ16568 116 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 AADACL3Q5VUY0 350 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 ZNRF1Q8ND25 227 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 GIMAP1Q8WWP7 306 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 UBTD1Q9HAC8 227 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 MGAT4AQ9UM21 535 aa17.36■□□□□ 0.37
PNKP-203ENST00000593946 PPIAL4EA0A075B759 164 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 PPIAL4DF5H284 164 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 GYPAP02724 150 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 SCTP09683 121 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 PPIAL4FP0DN26 164 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 ANXA7P20073 488 aaKnown RBP17.35■□□□□ 0.37
PNKP-203ENST00000593946 HLA-DRB3P79483 266 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 HFEQ30201 348 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 ATPAF1Q5TC12 328 aaPredicted RBP17.35■□□□□ 0.37
PNKP-203ENST00000593946 DHRS11Q6UWP2 260 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 ZNF788Q6ZQV5 615 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 ZDHHC22Q8N966 263 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 PPP1R35Q8TAP8 253 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 CCDC107Q8WV48 283 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 GAFA1Q96PS6 74 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 KIF25Q9UIL4 384 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 TRAPPC2LQ9UL33 140 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 LAMP3Q9UQV4 416 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 VSIG4Q9Y279 399 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 PPIAL4AQ9Y536 164 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 MGST3O14880 152 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 PRAF2O60831 178 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 RLN1P04808 185 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 HERPUD1Q15011 391 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 IGSF11Q5DX21 431 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 KRBOX4Q5JUW0 171 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 C5orf24Q7Z6I8 188 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 OR6F1Q8NGZ6 308 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 CHAC2Q8WUX2 184 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 BEX2Q9BXY8 128 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 GHITMQ9H3K2 345 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 LIME1Q9H400 295 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 ZNF665Q9H7R5 613 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 BEX1Q9HBH7 125 aa17.35■□□□□ 0.37
PNKP-203ENST00000593946 A0A0A6YYJ9 748 aa17.34■□□□□ 0.37
PNKP-203ENST00000593946 TRAV39A0A0B4J263 110 aa17.34■□□□□ 0.37
PNKP-203ENST00000593946 PFDN1O60925 122 aa17.34■□□□□ 0.37
PNKP-203ENST00000593946 TK1P04183 234 aa17.34■□□□□ 0.37
PNKP-203ENST00000593946 AKAP6Q13023 2319 aa17.34■□□□□ 0.37
PNKP-203ENST00000593946 SLC36A1Q7Z2H8 476 aa17.34■□□□□ 0.37
PNKP-203ENST00000593946 OR4A4PQ8NGN8 299 aa17.34■□□□□ 0.37
PNKP-203ENST00000593946 ZNF2Q9BSG1 426 aaPredicted RBP17.34■□□□□ 0.37
PNKP-203ENST00000593946 DNTTIP1Q9H147 329 aa17.34■□□□□ 0.37
PNKP-203ENST00000593946 IGKV1-6A0A0C4DH72 117 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 CLEC18AA5D8T8 446 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 OR5H14A6NHG9 310 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 SIGLEC5O15389 551 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 SELLP14151 372 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 COL8A2P25067 703 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 GLIPR1P48060 266 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 HMGN3Q15651 99 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 CLEC18BQ6UXF7 455 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 CLEC18CQ8NCF0 446 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 MARCH1Q8TCQ1 289 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 NEU4Q8WWR8 484 aaPredicted RBP17.33■□□□□ 0.37
PNKP-203ENST00000593946 CCL13Q99616 98 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 CABLES2Q9BTV7 478 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 ALX4Q9H161 411 aaPredicted RBP17.33■□□□□ 0.37
PNKP-203ENST00000593946 USF3Q68DE3 2245 aa17.33■□□□□ 0.37
PNKP-203ENST00000593946 MEIKINA0A087WXM9 373 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 A0A1B0GW55 424 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 IL5P05113 134 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 CTXN2P0C2S0 81 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 DUX4L2P0CJ85 424 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 DUX4L3P0CJ86 424 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 DUX4L4P0CJ87 422 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 DUX4L5P0CJ88 424 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 DUX4L6P0CJ89 424 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 DUX4L7P0CJ90 424 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 VSIG10L2P0DP72 767 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 GLP1RP43220 463 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 NPY4RP50391 375 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 DUX4L9Q6RFH8 374 aaPredicted RBP17.33■□□□□ 0.36
PNKP-203ENST00000593946 GLDNQ6ZMI3 551 aaPredicted RBP17.33■□□□□ 0.36
PNKP-203ENST00000593946 PEG10Q86TG7 708 aaKnown RBP17.33■□□□□ 0.36
PNKP-203ENST00000593946 OR5D13Q8NGL4 314 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 FAM234AQ9H0X4 552 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 MYOZ1Q9NP98 299 aaPredicted RBP17.33■□□□□ 0.36
PNKP-203ENST00000593946 DUX4Q9UBX2 424 aa17.33■□□□□ 0.36
PNKP-203ENST00000593946 LYNX1G3V0Z9 82 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 TNFRSF13BO14836 293 aaPredicted RBP17.32■□□□□ 0.36
PNKP-203ENST00000593946 RP2O75695 350 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 LYNX1P0DP58 116 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 FPR2P25090 351 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 FCGR2CP31995 323 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 SEC61A1P61619 476 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 351.1 ms