RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 RASL11BQ9BPW5 248 aa6.75□□□□□ -1.33
SMAD4-215ENST00000592911 NIPSNAP1Q9BPW8 284 aa6.75□□□□□ -1.33
SMAD4-215ENST00000592911 OSBPL10Q9BXB5 764 aa6.75□□□□□ -1.33
SMAD4-215ENST00000592911 RBFOX1Q9NWB1 397 aaKnown RBP6.75□□□□□ -1.33
SMAD4-215ENST00000592911 ZNF446Q9NWS9 450 aa6.75□□□□□ -1.33
SMAD4-215ENST00000592911 IDI2-AS1Q9NZ38 188 aa6.75□□□□□ -1.33
SMAD4-215ENST00000592911 COPS3Q9UNS2 423 aa6.75□□□□□ -1.33
SMAD4-215ENST00000592911 IGHV1-3A0A0C4DH29 117 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 MEX3AA1L020 520 aaKnown RBP6.74□□□□□ -1.33
SMAD4-215ENST00000592911 FAM90A10PA6NDY2 464 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 NCBP2LA6PVI3 153 aaKnown RBP6.74□□□□□ -1.33
SMAD4-215ENST00000592911 SAP30O75446 220 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 SULT1C4O75897 302 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 APOL3O95236 402 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 IGHV4-30-4P0DP06 118 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 DBTP11182 482 aaKnown RBP6.74□□□□□ -1.33
SMAD4-215ENST00000592911 SPNP16150 400 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 BCL3P20749 454 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 GDNFP39905 211 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 ZNF137PP52743 207 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 MTCP1P56278 107 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 AESQ08117 197 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 PDZK1IP1Q13113 114 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 C16orf89Q6UX73 402 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 BAIAP2L2Q6UXY1 529 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 ADAMTSL5Q6ZMM2 481 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 OVCH2Q7RTZ1 564 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 SATL1Q86VE3 508 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 IQCF1Q8N6M8 205 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 COQ2Q96H96 371 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 KCTD7Q96MP8 289 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 S1PR3Q99500 378 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 ADI1Q9BV57 179 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 BARHL1Q9BZE3 327 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 ZNF556Q9HAH1 456 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 RAB9BQ9NP90 201 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 PLSCR3Q9NRY6 295 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 CLN6Q9NWW5 311 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 CALYQ9NYX4 217 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 LINC00527Q9UJ94 153 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 PSG11Q9UQ72 335 aa6.74□□□□□ -1.33
SMAD4-215ENST00000592911 PLECQ15149 4684 aaKnown RBP6.73□□□□□ -1.33
SMAD4-215ENST00000592911 CCDC182A6NF36 153 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 ZNF670-ZNF695F2Z2N8 137 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 LINC01619G3V211 115 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 SIRPB1O00241 398 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 SLC33A1O00400 549 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-215ENST00000592911 KRT8P05787 483 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 ANXA8P13928 327 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 ZNF44P15621 663 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 GZMHP20718 246 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 NFYBP25208 207 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 PPIFP30405 207 aaKnown RBP6.73□□□□□ -1.33
SMAD4-215ENST00000592911 NPBWR2P48146 333 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 CXCR4P61073 352 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 KIAA0141Q14154 515 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-215ENST00000592911 ASPHD1Q5U4P2 390 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 STEAP3Q658P3 488 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 ELP2Q6IA86 826 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 PYHIN1Q6K0P9 492 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 Q6P435 159 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 CATSPERDQ86XM0 798 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 ZDHHC13Q8IUH4 622 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 BATF2Q8N1L9 274 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 TMEM104Q8NE00 496 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 MRGPRDQ8TDS7 321 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 FLYWCH2Q96CP2 140 aaKnown RBP6.73□□□□□ -1.33
SMAD4-215ENST00000592911 CPNE2Q96FN4 548 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-215ENST00000592911 ELAC2Q9BQ52 826 aaKnown RBP6.73□□□□□ -1.33
SMAD4-215ENST00000592911 ELOVL1Q9BW60 279 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 GAR1Q9NY12 217 aaKnown RBP6.73□□□□□ -1.33
SMAD4-215ENST00000592911 STUB1Q9UNE7 303 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 GTF2A1LQ9UNN4 478 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 ERGIC3Q9Y282 383 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 GSTK1Q9Y2Q3 226 aa6.73□□□□□ -1.33
SMAD4-215ENST00000592911 FAM172BPA6NC97 362 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 LINC01548A6NM66 108 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 PRR32B1ATL7 298 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 ISG15P05161 165 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 RAP2AP10114 183 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 ATF1P18846 271 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 CRIP2P52943 208 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-215ENST00000592911 PITPNAQ00169 270 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 HNF4GQ14541 408 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 IL13RA2Q14627 380 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 TMEM244Q5VVB8 128 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 NXNL2Q5VZ03 156 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 GID4Q8IVV7 300 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 SLC35F2Q8IXU6 374 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 YIPF7Q8N8F6 280 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 BBS1Q8NFJ9 593 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 DCUN1D4Q92564 292 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 OPALINQ96PE5 141 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 OR4C12Q96R67 309 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 IL36RNQ9UBH0 155 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
SMAD4-215ENST00000592911 MEIKINA0A087WXM9 373 aa6.71□□□□□ -1.34
SMAD4-215ENST00000592911 TCRBV5S2A0A599 114 aa6.71□□□□□ -1.34
SMAD4-215ENST00000592911 MAGEA13PA6NCF6 341 aa6.71□□□□□ -1.34
SMAD4-215ENST00000592911 TRIM64CA6NLI5 447 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms