RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TERB2Q8NHR7 220 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 IL1F10Q8WWZ1 152 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 CCL17Q92583 94 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 DYRK2Q92630 601 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 TOMM40LQ969M1 308 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 GALMQ96C23 342 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 ZNF486Q96H40 463 aaPredicted RBP5.21□□□□□ -1.58
LIG3-206ENST00000586058 PHB2Q99623 299 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 ZNF2Q9BSG1 426 aaPredicted RBP5.21□□□□□ -1.58
LIG3-206ENST00000586058 HDHD3Q9BSH5 251 aaPredicted RBP5.21□□□□□ -1.58
LIG3-206ENST00000586058 TMEM204Q9BSN7 226 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 FAM234AQ9H0X4 552 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 WDR13Q9H1Z4 485 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 GAL3ST2Q9H3Q3 398 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 SEBOXQ9HB31 216 aaPredicted RBP5.21□□□□□ -1.58
LIG3-206ENST00000586058 Q9N2K0 584 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 TMEM106BQ9NUM4 274 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 OR6C3Q9NZP0 311 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 IL36RNQ9UBH0 155 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 SLC23A1Q9UHI7 598 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 ZNF221Q9UK13 617 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 PCDHB10Q9UN67 800 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 DMXL2Q8TDJ6 3036 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 PRR14LQ5THK1 2151 aa5.21□□□□□ -1.58
LIG3-206ENST00000586058 DOCK11Q5JSL3 2073 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 ATMQ13315 3056 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 NCOR2Q9Y618 2525 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 TRGV10A0A0A0MS01 117 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 TRAV24A0A0B4J272 114 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 SNRPGP15A8MWD9 76 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 F8VVB4 439 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 F8VWA3 439 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 SDCBPO00560 298 aaPredicted RBP5.2□□□□□ -1.58
LIG3-206ENST00000586058 TMPRSS2O15393 492 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 NDUFB3O43676 98 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 RGS11O94810 467 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 NAPSAO96009 420 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 PLAUP00749 431 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 IL5P05113 134 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 ZNF728P0DKX0 622 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 PSG2P11465 335 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 AKR1C4P17516 323 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 NDUFB7P17568 137 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 EGR1P18146 543 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 ZBTB25P24278 435 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 LMO1P25800 156 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 RBMXP38159 391 aaKnown RBP5.2□□□□□ -1.58
LIG3-206ENST00000586058 CEBPDP49716 269 aaPredicted RBP5.2□□□□□ -1.58
LIG3-206ENST00000586058 RRAS2P62070 204 aaPredicted RBP5.2□□□□□ -1.58
LIG3-206ENST00000586058 DAZAP2Q15038 168 aaPredicted RBP5.2□□□□□ -1.58
LIG3-206ENST00000586058 CDSNQ15517 529 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 TEX36Q5VZQ5 186 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 CD276Q5ZPR3 534 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 FAHD2BQ6P2I3 314 aaPredicted RBP5.2□□□□□ -1.58
LIG3-206ENST00000586058 Q6P435 159 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 GLDNQ6ZMI3 551 aaPredicted RBP5.2□□□□□ -1.58
LIG3-206ENST00000586058 ZNF497Q6ZNH5 498 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 OVCH2Q7RTZ1 564 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 GLCCI1Q86VQ1 547 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 SGPP2Q8IWX5 399 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 C11orf53Q8IXP5 236 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 CMTM1Q8IZ96 169 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 FAM185AQ8N0U4 392 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 SPICQ8N5J4 248 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 OR4D10Q8NGI6 311 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 COQ8AQ8NI60 647 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 MRPL30Q8TCC3 161 aaKnown RBP5.2□□□□□ -1.58
LIG3-206ENST00000586058 MARCH1Q8TCQ1 289 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 EDARADDQ8WWZ3 215 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 NEUROG1Q92886 237 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 RAB1CQ92928 201 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 FAHD2AQ96GK7 314 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 OR51J1Q9H342 316 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 OPN4Q9UHM6 478 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 KIF25Q9UIL4 384 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 ZNF222Q9UK12 451 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 KCNS2Q9ULS6 477 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 LAMP3Q9UQV4 416 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 KCNIP3Q9Y2W7 256 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 KIAA2026Q5HYC2 2103 aa5.2□□□□□ -1.58
LIG3-206ENST00000586058 TLN1Q9Y490 2541 aaKnown RBP5.2□□□□□ -1.58
LIG3-206ENST00000586058 RP1L1Q8IWN7 2480 aaPredicted RBP5.19□□□□□ -1.58
LIG3-206ENST00000586058 IGHV3OR15-7A0A075B7D8 119 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 TEX13DA0A0J9YY54 714 aaPredicted RBP5.19□□□□□ -1.58
LIG3-206ENST00000586058 hADV38S2A0JD32 116 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 C7orf66A4D0T2 115 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 WIPF3A6NGB9 483 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 HMX3A6NHT5 357 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 A6NJY4 79 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 RNF212BA8MTL3 300 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 TMEM178BH3BS89 294 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 PYCARD-AS1I3L0S3 204 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 ADAM20O43506 726 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 LHBP01229 141 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 PPYP01298 95 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 GYPAP02724 150 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 OR4E1P0C645 316 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 GSTT2P0CG29 244 aa5.19□□□□□ -1.58
LIG3-206ENST00000586058 RPS2P15880 293 aaKnown RBP5.19□□□□□ -1.58
LIG3-206ENST00000586058 ANXA7P20073 488 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms