RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 RAX2Q96IS3 184 aa12.23□□□□□ -0.45
NME3-211ENST00000568561 MCRIP2Q9BUT9 160 aaKnown RBP12.23□□□□□ -0.45
NME3-211ENST00000568561 OSBPL10Q9BXB5 764 aa12.23□□□□□ -0.45
NME3-211ENST00000568561 DYNC2H1Q8NCM8 4307 aaKnown RBP12.22□□□□□ -0.45
NME3-211ENST00000568561 ERICH4A6NGS2 130 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 FGF16O43320 207 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 RPLP1P05386 114 aaKnown RBP12.22□□□□□ -0.45
NME3-211ENST00000568561 FCGR1AP12314 374 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 MTNR1BP49286 362 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 DGCR2P98153 550 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 C1orf146Q5VVC0 180 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 RSBN1Q5VWQ0 802 aaPredicted RBP12.22□□□□□ -0.45
NME3-211ENST00000568561 STPG2Q8N412 459 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 ZNF565Q8N9K5 539 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 OR10X1Q8NGY0 326 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 PRR25Q96S07 402 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 FAM192AQ9GZU8 254 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 ISG20L2Q9H9L3 353 aaKnown RBP12.22□□□□□ -0.45
NME3-211ENST00000568561 RHOFQ9HBH0 211 aa12.22□□□□□ -0.45
NME3-211ENST00000568561 HUWE1Q7Z6Z7 4374 aaKnown RBP12.21□□□□□ -0.45
NME3-211ENST00000568561 E9PI62 339 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 GABRPO00591 440 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 HSD17B6O14756 317 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 IGHG2P01859 326 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 DBTP11182 482 aaKnown RBP12.21□□□□□ -0.45
NME3-211ENST00000568561 C21orf33P30042 268 aaPredicted RBP12.21□□□□□ -0.45
NME3-211ENST00000568561 RAB7AP51149 207 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 SLC35B1P78383 322 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 ZIK1Q3SY52 487 aaPredicted RBP12.21□□□□□ -0.45
NME3-211ENST00000568561 FAM53AQ6NSI3 398 aaPredicted RBP12.21□□□□□ -0.45
NME3-211ENST00000568561 UNQ9370/PRO34162Q6UXP9 181 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 MOB3BQ86TA1 216 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 LHFPL3Q86UP9 236 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 FOXRED2Q8IWF2 684 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 OR8H3Q8N146 312 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 ACBD7Q8N6N7 88 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 OR51A2Q8NGJ7 313 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 TNFAIP8L1Q8WVP5 186 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 TSEN15Q8WW01 171 aaKnown RBP12.21□□□□□ -0.45
NME3-211ENST00000568561 LGALS12Q96DT0 336 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 CENPNQ96H22 339 aaPredicted RBP12.21□□□□□ -0.45
NME3-211ENST00000568561 PDCD1LG2Q9BQ51 273 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 ALG8Q9BVK2 526 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 ZFP57Q9NU63 452 aa12.21□□□□□ -0.45
NME3-211ENST00000568561 NCBP2LA6PVI3 153 aaKnown RBP12.2□□□□□ -0.46
NME3-211ENST00000568561 NPIPB11E5RHQ5 1161 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 CCL24O00175 119 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 ZFPL1O95159 310 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 GPR12P47775 334 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 ELP2Q6IA86 826 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 SATL1Q86VE3 508 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 HAVCR2Q8TDQ0 301 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 EAF1Q96JC9 268 aaPredicted RBP12.2□□□□□ -0.46
NME3-211ENST00000568561 GPER1Q99527 375 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 BARHL1Q9BZE3 327 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 LINC00574Q9H8X3 128 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 DHDHQ9UQ10 334 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 RYR2Q92736 4967 aa12.2□□□□□ -0.46
NME3-211ENST00000568561 IGHV1-3A0A0C4DH29 117 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 CCRL2O00421 344 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 HTR3BO95264 441 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 SLC6A1P30531 599 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 SOX2P48431 317 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 SNRPGP62308 76 aaKnown RBP12.19□□□□□ -0.46
NME3-211ENST00000568561 RSU1Q15404 277 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 SERPINA12Q8IW75 414 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 PARP16Q8N5Y8 322 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 OR5D14Q8NGL3 314 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 TRUB1Q8WWH5 349 aaKnown RBP12.19□□□□□ -0.46
NME3-211ENST00000568561 DPCDQ9BVM2 203 aaPredicted RBP12.19□□□□□ -0.46
NME3-211ENST00000568561 DCLRE1BQ9H816 532 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 TAS2R4Q9NYW5 299 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 EXOGQ9Y2C4 368 aaKnown RBP12.19□□□□□ -0.46
NME3-211ENST00000568561 U3KQK5 164 aa12.19□□□□□ -0.46
NME3-211ENST00000568561 IGHV3-43A0A0B4J1X8 118 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 EI24O14681 340 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 CDRT1O95170 752 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 ALPLP05186 524 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 IGHV3-43DP0DP04 118 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 DCTN2Q13561 401 aaKnown RBP12.18□□□□□ -0.46
NME3-211ENST00000568561 IL13RA2Q14627 380 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 NKAPLQ5M9Q1 402 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 MEDAGQ5VYS4 303 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 TEX38Q6PEX7 206 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 COMMD1Q8N668 190 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 Q8N6K4 173 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 SUMF2Q8NBJ7 301 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 PXT1Q8NFP0 134 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 OR5AK2Q8NH90 309 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 RGP1Q92546 391 aaPredicted RBP12.18□□□□□ -0.46
NME3-211ENST00000568561 ASCL2Q99929 193 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 NCOR1P1Q9H4R4 102 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 AMBNQ9NP70 447 aa12.18□□□□□ -0.46
NME3-211ENST00000568561 TMEM212A6NML5 194 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 ZNF736B4DX44 427 aaPredicted RBP12.17□□□□□ -0.46
NME3-211ENST00000568561 AP4M1O00189 453 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 OR7C1O76099 320 aaPredicted RBP12.17□□□□□ -0.46
NME3-211ENST00000568561 GAPDHP04406 335 aaKnown RBP12.17□□□□□ -0.46
NME3-211ENST00000568561 RAB3AP20336 220 aa12.17□□□□□ -0.46
NME3-211ENST00000568561 ECI1P42126 302 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms