RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 MYOTQ9UBF9 498 aa14.09□□□□□ -0.15
LINC00554-201ENST00000564841 GCGP01275 180 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 CEACAM1P13688 526 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 FAHP16930 419 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 HSF1Q00613 529 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 ZNF266Q14584 549 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 SLC16A14Q7RTX9 510 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 ADIPOR1Q96A54 375 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 RSG1Q9BU20 258 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 AKIRIN1Q9H9L7 192 aaPredicted RBP14.08□□□□□ -0.16
LINC00554-201ENST00000564841 MRPS18CQ9Y3D5 142 aaKnown RBP14.08□□□□□ -0.16
LINC00554-201ENST00000564841 ASPMQ8IZT6 3477 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 DCAF10Q5QP82 559 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 OR4D5Q8NGN0 318 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 NAT6Q93015 286 aa14.08□□□□□ -0.16
LINC00554-201ENST00000564841 NCOA6Q14686 2063 aaPredicted RBP14.08□□□□□ -0.16
LINC00554-201ENST00000564841 SPTBN2O15020 2390 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 HMGB3O15347 200 aaKnown RBP14.07□□□□□ -0.16
LINC00554-201ENST00000564841 TCF21O43680 179 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 MT-ATP6P00846 226 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 VAMP2P63027 116 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 IGLV3-21P80748 117 aaPredicted RBP14.07□□□□□ -0.16
LINC00554-201ENST00000564841 MRPS34P82930 218 aaKnown RBP14.07□□□□□ -0.16
LINC00554-201ENST00000564841 ALKBH2Q6NS38 261 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 DEGS2Q6QHC5 323 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 OR5T1Q8NG75 326 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 TGOLN2O43493 480 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 CST2P09228 141 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 DCAF7P61962 342 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 TMEM256Q8N2U0 113 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 IL22RA1Q8N6P7 574 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 SRD5A3Q9H8P0 318 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 MAP1BP46821 2468 aaKnown RBP14.07□□□□□ -0.16
LINC00554-201ENST00000564841 CNOT1A5YKK6 2376 aaKnown RBP14.07□□□□□ -0.16
LINC00554-201ENST00000564841 A0A1W2PQM1 296 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 CEBPZOSA8MTT3 80 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 ZNF705FA8MVS1 300 aaPredicted RBP14.07□□□□□ -0.16
LINC00554-201ENST00000564841 SPRY1O43609 319 aaPredicted RBP14.07□□□□□ -0.16
LINC00554-201ENST00000564841 ZNF705DP0CH99 300 aaPredicted RBP14.07□□□□□ -0.16
LINC00554-201ENST00000564841 ZNF705BP0CI00 300 aaPredicted RBP14.07□□□□□ -0.16
LINC00554-201ENST00000564841 NKX2-1P43699 371 aaPredicted RBP14.07□□□□□ -0.16
LINC00554-201ENST00000564841 ZNF283Q8N7M2 679 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 SDSLQ96GA7 329 aa14.07□□□□□ -0.16
LINC00554-201ENST00000564841 CPAMD8Q8IZJ3 1885 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 LAMTOR5O43504 91 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 RPLP1P05386 114 aaKnown RBP14.06□□□□□ -0.16
LINC00554-201ENST00000564841 UCP3P55916 312 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 RPRMQ9NS64 109 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 FKBP11Q9NYL4 201 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 HSPA12AO43301 675 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 OPN1MWP04001 364 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 PFN1P07737 140 aaKnown RBP14.06□□□□□ -0.16
LINC00554-201ENST00000564841 OPN1MW2P0DN77 364 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 OPN1MW3P0DN78 364 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 MLF1P58340 268 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 D2HGDHQ8N465 521 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 ZNF501Q96CX3 271 aaPredicted RBP14.06□□□□□ -0.16
LINC00554-201ENST00000564841 SLC46A1Q96NT5 459 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 PCED1AQ9H1Q7 454 aa14.06□□□□□ -0.16
LINC00554-201ENST00000564841 FAM186AA6NE01 2351 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 DOCK11Q5JSL3 2073 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 A0A1B0GX78 115 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 ETV2O00321 342 aaPredicted RBP14.05□□□□□ -0.16
LINC00554-201ENST00000564841 EPHA8P29322 1005 aaPredicted RBP14.05□□□□□ -0.16
LINC00554-201ENST00000564841 TLE3Q04726 772 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 TCFL5Q9UL49 500 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 SERPINE3A8MV23 424 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 PITX3O75364 302 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 OR5I1Q13606 314 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 IQCJQ1A5X6 159 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 IZUMO4Q1ZYL8 232 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 CST9LP1Q5W188 147 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 SLC25A26Q70HW3 274 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 RPUSD4Q96CM3 377 aaKnown RBP14.05□□□□□ -0.16
LINC00554-201ENST00000564841 LYZL4Q96KX0 146 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 WWTR1Q9GZV5 400 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 C11orf1Q9H5F2 150 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 LPAR2Q9HBW0 351 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 COPS7AQ9UBW8 275 aa14.05□□□□□ -0.16
LINC00554-201ENST00000564841 B4DEV8 164 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 ZNF726P1Q15940 193 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 MYPOPQ86VE0 399 aaPredicted RBP14.04□□□□□ -0.16
LINC00554-201ENST00000564841 IL22RA2Q969J5 263 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 AURKAIP1Q9NWT8 199 aaPredicted RBP14.04□□□□□ -0.16
LINC00554-201ENST00000564841 A0A1W2PNR3 127 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 PPP5D1E7EU14 171 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 F5H5K5 113 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 ADAM20O43506 726 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 SCRG1O75711 98 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 HPRT1P00492 218 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 GALNSP34059 522 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 C1orf194Q5T5A4 169 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 DNM1P34Q6PK57 102 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 TMEM18Q96B42 140 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 TBX15Q96SF7 602 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 PLEKHF2Q9H8W4 249 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 VAX2Q9UIW0 290 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 TMEM210A6NLX4 147 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 H3BMH7 237 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 IGKV3-11P04433 115 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms