RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 FAM90A12PA8MX19 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A5PA8MXJ8 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A23PA8MXZ1 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 DNPH1O43598 174 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 DFFBO76075 338 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A15PP0C7V4 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A13PP0C7W8 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A14PP0C7W9 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FAM90A24PP0C7X0 464 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 NTF4P34130 210 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 CDPF1Q6NVV7 123 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 STX12Q86Y82 276 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 PLPPR1Q8TBJ4 325 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 WNT5BQ9H1J7 359 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 CALHM2Q9HA72 323 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 GFOD1Q9NXC2 390 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 TRAV1-1A0A0B4J248 108 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 SLC22A20A6NK97 555 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 NDUFS6O75380 124 aaKnown RBP15.08■□□□□ 0
SYNE3-202ENST00000553340 SCTP09683 121 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 SSR4P51571 173 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 CLDN15P56746 228 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 PCBD1P61457 104 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 CCL7P80098 99 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 AAED1Q7RTV5 226 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 HIST3H2BBQ8N257 126 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 DNASE2BQ8WZ79 361 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 FOXB1Q99853 325 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 GPR61Q9BZJ8 451 aa15.08■□□□□ 0
SYNE3-202ENST00000553340 KIAA1549Q9HCM3 1950 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 LOC102723996A0A087X1L8 192 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 CBR3O75828 277 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 SOD3P08294 240 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 HIST1H1BP16401 226 aaKnown RBP15.07■□□□□ 0
SYNE3-202ENST00000553340 CD200P41217 278 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 SLC25A24Q6NUK1 477 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 C1orf87Q8N0U7 546 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 FAM210BQ96KR6 192 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 CCDC74BQ96LY2 380 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 GNG13Q9P2W3 67 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 IGKV1D-13A0A0B4J2D9 117 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 IFNA5P01569 189 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 IGKV1-13P0DP09 117 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 GPX4P36969 197 aaPredicted RBP15.07■□□□□ 0
SYNE3-202ENST00000553340 RPS18P62269 152 aaKnown RBP15.07■□□□□ 0
SYNE3-202ENST00000553340 PNRC1Q12796 327 aaPredicted RBP15.07■□□□□ 0
SYNE3-202ENST00000553340 OR2T2Q6IF00 324 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 C5orf24Q7Z6I8 188 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 THNSL2Q86YJ6 484 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 OR5D13Q8NGL4 314 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 IL22RA2Q969J5 263 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 CCL28Q9NRJ3 127 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 RNF115Q9Y4L5 304 aa15.07■□□□□ 0
SYNE3-202ENST00000553340 IGHV1-45A0A0A0MS14 117 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 ATXN7O15265 892 aaPredicted RBP15.06■□□□□ 0
SYNE3-202ENST00000553340 NAPSAO96009 420 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 PAX9P55771 341 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 RAB11AP62491 216 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 CEACAM16Q2WEN9 425 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 GFI1BQ5VTD9 330 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 H1FOOQ8IZA3 346 aaPredicted RBP15.06■□□□□ 0
SYNE3-202ENST00000553340 Q8NFD4 153 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 PRDM13Q9H4Q3 707 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 WDR54Q9H977 334 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 KIR2DS1A0A191URI9 304 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 H0Y980 276 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 TGOLN2O43493 480 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 TUSC2O75896 110 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 PTBP3O95758 552 aaKnown RBP15.06■□□□□ 0
SYNE3-202ENST00000553340 KIR2DS4P43632 304 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 CARD18P57730 90 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 KIR2DS1Q14954 304 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 PDZD11Q5EBL8 140 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 FGFBP3Q8TAT2 258 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 TMEM242Q9NWH2 141 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 TAAR3PQ9P1P4 343 aa15.06■□□□□ 0
SYNE3-202ENST00000553340 OR5H1A6NKK0 313 aa15.05■□□□□ 0
SYNE3-202ENST00000553340 CTXN2P0C2S0 81 aa15.05■□□□□ 0
SYNE3-202ENST00000553340 TRGC1P0CF51 173 aa15.05■□□□□ 0
SYNE3-202ENST00000553340 EDN3P14138 238 aa15.05■□□□□ 0
SYNE3-202ENST00000553340 BCL3P20749 454 aa15.05■□□□□ 0
SYNE3-202ENST00000553340 HERPUD1Q15011 391 aa15.05■□□□□ 0
SYNE3-202ENST00000553340 TRIM61Q5EBN2 209 aa15.05■□□□□ 0
SYNE3-202ENST00000553340 IMMP1LQ96LU5 166 aa15.05■□□□□ 0
SYNE3-202ENST00000553340 ZNF716A6NP11 495 aa15.05■□□□□ -0
SYNE3-202ENST00000553340 CLDN34H7C241 214 aa15.05■□□□□ -0
SYNE3-202ENST00000553340 DNLZQ5SXM8 178 aa15.05■□□□□ -0
SYNE3-202ENST00000553340 FAM90A2PQ658T7 463 aa15.05■□□□□ -0
SYNE3-202ENST00000553340 SPSB4Q96A44 273 aa15.05■□□□□ -0
SYNE3-202ENST00000553340 SH2D2AQ9NP31 389 aa15.05■□□□□ -0
SYNE3-202ENST00000553340 CISD1Q9NZ45 108 aaKnown RBP15.05■□□□□ -0
SYNE3-202ENST00000553340 CD81P60033 236 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 NEK7Q8TDX7 302 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 ABHD5Q8WTS1 349 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 FRZBQ92765 325 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 S100PBPQ96BU1 408 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 ZFP92A6NM28 416 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 TNFSF12O43508 249 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 LY86O95711 162 aa15.04■□□□□ -0
SYNE3-202ENST00000553340 KLK3P07288 261 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms