RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 LINC01590Q5TEZ4 76 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 ANKRD37Q7Z713 158 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 H1FOOQ8IZA3 346 aaPredicted RBP16.97■□□□□ 0.31
SUDS3-204ENST00000543473 SCCPDHQ8NBX0 429 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 DEFB108BQ8NET1 73 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 A0A1W2PR80 420 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 TOX3O15405 576 aaPredicted RBP16.97■□□□□ 0.31
SUDS3-204ENST00000543473 LBHQ53QV2 105 aaPredicted RBP16.97■□□□□ 0.31
SUDS3-204ENST00000543473 TMEM211Q6ICI0 200 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 OR5AU1Q8NGC0 362 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 APOBEC4Q8WW27 367 aaKnown RBP16.97■□□□□ 0.31
SUDS3-204ENST00000543473 CARHSP1Q9Y2V2 147 aaKnown RBP16.97■□□□□ 0.31
SUDS3-204ENST00000543473 NKX6-3A6NJ46 265 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 PITX3O75364 302 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 BCL2P10415 239 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 DEFA4P12838 97 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 FCER1GP30273 86 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 S100A7P31151 101 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 RAC1P63000 192 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 OR5I1Q13606 314 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 RPEL1Q2QD12 228 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 TMEM252Q8N6L7 170 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 RFESDQ8TAC1 157 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 PAM16Q9Y3D7 125 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 CD74P04233 296 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 FOXO1Q12778 655 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 SPINK9Q5DT21 86 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 WDR73Q6P4I2 378 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 DYRK2Q92630 601 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 SLC7A10Q9NS82 523 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 PCOLCE2Q9UKZ9 415 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 H0YL77 283 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 COX7A2P2O60397 106 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 DXOO77932 396 aaKnown RBP16.96■□□□□ 0.31
SUDS3-204ENST00000543473 THY1P04216 161 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 TMEM50BP56557 158 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 HFEQ30201 348 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 PIGYQ3MUY2 71 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 DHRS13Q6UX07 377 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 PAGE4O60829 102 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 CYB5R3P00387 301 aaPredicted RBP16.96■□□□□ 0.31
SUDS3-204ENST00000543473 MMP9P14780 707 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 USF1P22415 310 aaPredicted RBP16.96■□□□□ 0.31
SUDS3-204ENST00000543473 SMIM21Q3B7S5 101 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 SLC35E3Q7Z769 313 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 EIF4E3Q8N5X7 224 aaKnown RBP16.96■□□□□ 0.31
SUDS3-204ENST00000543473 ZNRF4Q8WWF5 429 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 GDF15Q99988 308 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 MENTQ9BUN1 341 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 SARGQ9BW04 601 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 ZNF835Q9Y2P0 537 aa16.96■□□□□ 0.31
SUDS3-204ENST00000543473 SLC31A2O15432 143 aa16.96■□□□□ 0.3
SUDS3-204ENST00000543473 CA6P23280 308 aa16.96■□□□□ 0.3
SUDS3-204ENST00000543473 GLRX5Q86SX6 157 aa16.96■□□□□ 0.3
SUDS3-204ENST00000543473 GGACTQ9BVM4 153 aa16.96■□□□□ 0.3
SUDS3-204ENST00000543473 ANGPTL4Q9BY76 406 aa16.96■□□□□ 0.3
SUDS3-204ENST00000543473 C5orf66Q9H5L9 145 aa16.96■□□□□ 0.3
SUDS3-204ENST00000543473 FCGR3BO75015 233 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 IL3RAP26951 378 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 RHOBP62745 196 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 ACSM6Q6P461 480 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 VASH2Q86V25 355 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 DEFB127Q9H1M4 99 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 TPRP12270 2363 aaKnown RBP16.95■□□□□ 0.3
SUDS3-204ENST00000543473 HSPB1P04792 205 aaKnown RBP16.95■□□□□ 0.3
SUDS3-204ENST00000543473 PNLIPP16233 465 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 RPS4Y1P22090 263 aaKnown RBP16.95■□□□□ 0.3
SUDS3-204ENST00000543473 SPEM2Q0P670 501 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 IP6K3Q96PC2 410 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 OR2D2Q9H210 308 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 OCIAD1Q9NX40 245 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 LMX1BO60663 402 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 FAM3BP58499 235 aaPredicted RBP16.95■□□□□ 0.3
SUDS3-204ENST00000543473 TM4SF19Q96DZ7 209 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 ACY3Q96HD9 319 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 GSN-AS1Q9NRJ2 163 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 SLC45A2Q9UMX9 530 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 SERTM2A0A1B0GWG4 89 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 FOXS1O43638 330 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 LRP11Q86VZ4 500 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 TBX15Q96SF7 602 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 IER2Q9BTL4 223 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 LRFN3Q9BTN0 628 aa16.95■□□□□ 0.3
SUDS3-204ENST00000543473 DNAJC13O75165 2243 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 PPP1CCP36873 323 aaKnown RBP16.94■□□□□ 0.3
SUDS3-204ENST00000543473 PAX5Q02548 391 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 SLC2A8Q9NY64 477 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 GVINP1Q7Z2Y8 2422 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 C16orf82Q7Z2V1 217 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 ZADH2Q8N4Q0 377 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 B2MP61769 119 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 RBPJQ06330 500 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.94■□□□□ 0.3
SUDS3-204ENST00000543473 MRGPRFQ96AM1 343 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 STARD4Q96DR4 205 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 FAM122AQ96E09 287 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 PSG11Q9UQ72 335 aa16.94■□□□□ 0.3
SUDS3-204ENST00000543473 YTHDF2Q9Y5A9 579 aaKnown RBP16.94■□□□□ 0.3
SUDS3-204ENST00000543473 ACTL6AO96019 429 aa16.93■□□□□ 0.3
SUDS3-204ENST00000543473 ISG15P05161 165 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms