RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 HLA-AP01891 365 aaKnown RBP2.07□□□□□ -2.08
PRKDC-205ENST00000535375 SCGB1C2P0DMR2 95 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 GTF2F2P13984 249 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 CRATP43155 626 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 STC1P52823 247 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 NIPAL1Q6NVV3 410 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 AMN1Q8IY45 258 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 BOD1L2Q8IYS8 172 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 MUC15Q8N387 334 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 RPRMLQ8N4K4 120 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 GATD1Q8NB37 220 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 OR5AK3PQ8NH89 298 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 SCGB1C1Q8TD33 95 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 ZNF251Q9BRH9 671 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 ANAPC13Q9BS18 74 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 EBPLQ9BY08 206 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 OR51E2Q9H255 320 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 METTL17Q9H7H0 456 aaPredicted RBP2.07□□□□□ -2.08
PRKDC-205ENST00000535375 ASCL3Q9NQ33 180 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 C1orf109Q9NX04 203 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 FBXL3Q9UKT7 428 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 TBL2Q9Y4P3 447 aaKnown RBP2.07□□□□□ -2.08
PRKDC-205ENST00000535375 SDK2Q58EX2 2172 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 RAD50Q92878 1312 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 IGHV1-45A0A0A0MS14 117 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 F5H5P2 479 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 TOR1AO14656 332 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 CETN3O15182 167 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 TOX3O15405 576 aaPredicted RBP2.06□□□□□ -2.08
PRKDC-205ENST00000535375 FGF16O43320 207 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 SPNP16150 400 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 ZNF83P51522 516 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 FAM3AP98173 230 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 TTMPQ5BVD1 217 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 LDLRAD2Q5SZI1 272 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 SMARCD3Q6STE5 483 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 CRLF3Q8IUI8 442 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 C3orf22Q8N5N4 141 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 CASTOR1Q8WTX7 329 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 TWIST2Q8WVJ9 160 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 MAL2Q969L2 176 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 PYURFQ96I23 114 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 B9D2Q9BPU9 175 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 UGT2B28Q9BY64 529 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 TXNIPQ9H3M7 391 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 WDR54Q9H977 334 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 ZNF492Q9P255 531 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 PUS1Q9Y606 427 aaKnown RBP eCLIP2.06□□□□□ -2.08
PRKDC-205ENST00000535375 ARAP3Q8WWN8 1544 aa2.06□□□□□ -2.08
PRKDC-205ENST00000535375 C9J4A7 227 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 H3BQ85 93 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 GPR171O14626 319 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 PHYHO14832 338 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 RGS5O15539 181 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 ENTPD6O75354 484 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 POP7O75817 140 aaKnown RBP2.05□□□□□ -2.08
PRKDC-205ENST00000535375 YEATS4O95619 227 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 RD3LP0DJH9 198 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 PYCR1P32322 319 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 TGFBR2P37173 567 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 RAB8AP61006 207 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 RHOAP61586 193 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 NXNL2Q5VZ03 156 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 FAM19A3Q7Z5A8 133 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 C2orf15Q8WU43 125 aaKnown RBP2.05□□□□□ -2.08
PRKDC-205ENST00000535375 CCDC12Q8WUD4 166 aaPredicted RBP2.05□□□□□ -2.08
PRKDC-205ENST00000535375 CLDN23Q96B33 292 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 PPWD1Q96BP3 646 aaKnown RBP2.05□□□□□ -2.08
PRKDC-205ENST00000535375 TMEM56Q96MV1 263 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 TAS2R1Q9NYW7 299 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 POMPQ9Y244 141 aa2.05□□□□□ -2.08
PRKDC-205ENST00000535375 SAMHD1Q9Y3Z3 626 aaKnown RBP2.05□□□□□ -2.08
PRKDC-205ENST00000535375 A8MWP4 228 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 GOLGA8RI6L899 631 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 AQP9O43315 295 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 CYTH3O43739 400 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 DEDDO75618 318 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 SOX14O95416 240 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 RAB36O95755 333 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 IGKV1D-33P01593 117 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 IGKV1-33P01594 117 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 GZMMP51124 257 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 MAP3K7CLP57077 242 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 FMODQ06828 376 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 CASP8Q14790 479 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 PTPRKQ15262 1439 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 MMDQ15546 238 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 ZNHIT3Q15649 155 aaPredicted RBP2.04□□□□□ -2.08
PRKDC-205ENST00000535375 MIA3Q5JRA6 1907 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 MTERF4Q7Z6M4 381 aaKnown RBP2.04□□□□□ -2.08
PRKDC-205ENST00000535375 C10orf107Q8IVU9 208 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 RBPMSQ93062 196 aaKnown RBP2.04□□□□□ -2.08
PRKDC-205ENST00000535375 ZNF514Q96K75 400 aaPredicted RBP2.04□□□□□ -2.08
PRKDC-205ENST00000535375 ULBP1Q9BZM6 244 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 NDEL1Q9GZM8 345 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 FBXL15Q9H469 300 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 COMMD9Q9P000 198 aa2.04□□□□□ -2.08
PRKDC-205ENST00000535375 VWA8A3KMH1 1905 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 FABP12A6NFH5 140 aa2.03□□□□□ -2.08
PRKDC-205ENST00000535375 ZNF729A6NN14 1252 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms