RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MARC2Q969Z3 335 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 ASB9Q96DX5 294 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 SMIM10Q96HG1 83 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 SERPINB12Q96P63 405 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 MMP26Q9NRE1 261 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 CLN6Q9NWW5 311 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 FLVCR2Q9UPI3 526 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 SMAD5-AS1Q9Y6J3 95 aa3.36□□□□□ -1.87
HMGB1P23-201ENST00000518743 A0A0J9YXY3 114 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 A6NDN8 102 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 ERICH4A6NGS2 130 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 TEX46H3BTG2 121 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 ICOSLGO75144 302 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 ETHE1O95571 254 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 HCAR3P49019 387 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 IRF8Q02556 426 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 RELAQ04206 551 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 AQP6Q13520 282 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 KIAA0087Q14695 138 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR7A5Q15622 319 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 VAMP3Q15836 100 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 TTMPQ5BVD1 217 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 Q6ZT83 130 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 PLCZ1Q86YW0 608 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZBED8Q8IZ13 594 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 CA13Q8N1Q1 262 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR8K1Q8NGG5 319 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR5B3Q8NH48 314 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 DOK4Q8TEW6 326 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF721Q8TF20 911 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 GEMIN6Q8WXD5 167 aaKnown RBP3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 ARPC1AQ92747 370 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 MYDGFQ969H8 173 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 YIPF5Q969M3 257 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 IMP4Q96G21 291 aaKnown RBP3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 PEBP4Q96S96 227 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 PARP12Q9H0J9 701 aaKnown RBP3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF337Q9Y3M9 751 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 KCNE3Q9Y6H6 103 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 USH1CQ9Y6N9 552 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
HMGB1P23-201ENST00000518743 FSIP2Q5CZC0 6907 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 SORL1Q92673 2214 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 A0A0G2JN53 185 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 LOC100506127A0A0U1RQW1 187 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 A0A1W2PRF3 423 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 A0A1W2PRM7 423 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF726A6NNF4 738 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 RAB3DO95716 219 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 C6orf47O95873 294 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 IGHMP01871 453 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 CHTF8P0CG12 524 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF250P15622 560 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 TGFBR2P37173 567 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 BTN3A2P78410 334 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 IGLV3-21P80748 117 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 Q3ZCU0 254 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZBED5Q49AG3 693 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZCWPW2Q504Y3 356 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 GPR107Q5VW38 600 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 ANKRD22Q5VYY1 191 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 C6orf89Q6UWU4 347 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 OAFQ86UD1 273 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 MREGQ8N565 214 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR4C13Q8NGP0 309 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR13C4Q8NGS5 318 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR10D3Q8NH80 312 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 ABHD3Q8WU67 409 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 C16orf74Q96GX8 76 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 TMEM101Q96IK0 257 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 GPR21Q99679 349 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 MCUBQ9NWR8 336 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 Q9UF83 564 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR5V1Q9UGF6 321 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 CFAP45Q9UL16 551 aa3.34□□□□□ -1.87
HMGB1P23-201ENST00000518743 IGLV3-16A0A075B6K0 115 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 A0A0G2JLM5 398 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 A0A1B0GVI7 797 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 A0A1B0GVY2 172 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 ZFP92A6NM28 416 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 CLDN25C9JDP6 229 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 F6UB75 175 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 M0R233 179 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 PEX7O00628 323 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 RAD51CO43502 376 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 LHBP01229 141 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 IFNA6P05013 189 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 ARG1P05089 322 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 CALB1P05937 261 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 KRT16P08779 473 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 CTRB1P17538 263 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 PMCHP20382 165 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 CCR7P32248 378 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 CRISP1P54107 249 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 PRPS1P60891 318 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 XIAPP98170 497 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 CDH17Q12864 832 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 TAF1AQ15573 450 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 RFX4Q33E94 735 aa3.33□□□□□ -1.88
HMGB1P23-201ENST00000518743 PAGE3Q5JUK9 113 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms